RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 HIDE1A8MVS5 230 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 FIBPO43427 364 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 STAM2O75886 525 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 SARSP49591 514 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 PPFIA1Q13136 1202 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 GRIK4Q16099 956 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 UTP14CQ5TAP6 766 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 PLPP4Q5VZY2 271 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 THNSL1Q8IYQ7 743 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 TMX1Q9H3N1 280 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 CHMP4BQ9H444 224 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 CWH43Q9H720 699 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 NGRNQ9NPE2 291 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 TRPV2Q9Y5S1 764 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 HCFC2Q9Y5Z7 792 aa12.17□□□□□ -0.46
RAPGEF1-205ENST00000419442 KDM3AQ9Y4C1 1321 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 WDR87Q6ZQQ6 2873 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 NT5C2P49902 561 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 IER5Q5VY09 327 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 LLGL2Q6P1M3 1020 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 MIER1Q8N108 512 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 CYP2W1Q8TAV3 490 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 RUBCNQ92622 972 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 TCF25Q9BQ70 676 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 DCTPP1Q9H773 170 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 ERVK-5Q9HDB9 667 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 LIMD1Q9UGP4 676 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
RAPGEF1-205ENST00000419442 LAG3P18627 525 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 PAK2Q13177 524 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 SPOUT1Q5T280 376 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 MFSD6Q6ZSS7 791 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 VAT1LQ9HCJ6 419 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 CYP26B1Q9NR63 512 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 HELLSQ9NRZ9 838 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 TYW1Q9NV66 732 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 PUF60Q9UHX1 559 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 DUSP12Q9UNI6 340 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 R4GN57 208 aa12.15□□□□□ -0.46
RAPGEF1-205ENST00000419442 SPTBN2O15020 2390 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 C9IYK1 514 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 MGEA5O60502 916 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 EOMESO95936 686 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 TDGQ13569 410 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 ST3GAL2Q16842 350 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 RSPO4Q2I0M5 234 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 ESR2Q92731 530 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 CELF4Q9BZC1 486 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 ENTPD7Q9NQZ7 604 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 C1orf112Q9NSG2 853 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 PCDHB7Q9Y5E2 793 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 CHD6Q8TD26 2715 aa12.14□□□□□ -0.47
RAPGEF1-205ENST00000419442 NEDD4P46934 1319 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 USP24Q9UPU5 2620 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 GSTTP1A0A1W2PQM5 241 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZBTB5O15062 677 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 CLASP2O75122 1294 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 PDE4AP27815 886 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 HAND2P61296 217 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 FAM102BQ5T8I3 360 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 FCHSD1Q86WN1 690 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 DCLK2Q8N568 766 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 SUMF1Q8NBK3 374 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 FAM49AQ9H0Q0 323 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 RNF41Q9H4P4 317 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 RGS18Q9NS28 235 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 PCDHA2Q9Y5H9 948 aa12.13□□□□□ -0.47
RAPGEF1-205ENST00000419442 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 C2orf71A6NGG8 1288 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms