RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
GTF3A-202ENST00000419181 BRMS1Q9HCU9 246 aa22.97■■□□□ 1.27
GTF3A-202ENST00000419181 SH2B1Q9NRF2 756 aaPredicted RBP22.97■■□□□ 1.27
GTF3A-202ENST00000419181 DDX25Q9UHL0 483 aaKnown RBP22.97■■□□□ 1.27
GTF3A-202ENST00000419181 MSRAQ9UJ68 235 aa22.97■■□□□ 1.27
GTF3A-202ENST00000419181 IGSF9BQ9UPX0 1349 aa22.97■■□□□ 1.27
GTF3A-202ENST00000419181 MICAL3Q7RTP6 2002 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 ABHD14A-ACY1A0A1B0GW23 586 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 SLC37A4O43826 429 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 HBP1O60381 514 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 GCFC2P16383 781 aaKnown RBP22.96■■□□□ 1.27
GTF3A-202ENST00000419181 RABGGTBP53611 331 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 WDR5P61964 334 aaKnown RBP22.96■■□□□ 1.27
GTF3A-202ENST00000419181 PLEKHG4Q58EX7 1191 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 PPP4R3AQ6IN85 833 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 RSPH3Q86UC2 560 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 DNAJB3Q8WWF6 145 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 CDX2Q99626 313 aaPredicted RBP22.96■■□□□ 1.27
GTF3A-202ENST00000419181 OSBPL7Q9BZF2 842 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 UNC45AQ9H3U1 944 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 DISC1Q9NRI5 854 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 YBX2Q9Y2T7 364 aaKnown RBP22.96■■□□□ 1.27
GTF3A-202ENST00000419181 SAMM50Q9Y512 469 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 PCDHA11Q9Y5I1 949 aa22.96■■□□□ 1.27
GTF3A-202ENST00000419181 FAM205CA6NFA0 338 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 EFCAB14O75071 495 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 CHRNA1P02708 482 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 RPLP2P05387 115 aaKnown RBP22.95■■□□□ 1.26
GTF3A-202ENST00000419181 COL1A2P08123 1366 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 SFNP31947 248 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 KCNJ6P48051 423 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 JAK3P52333 1124 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 MGAT3Q09327 533 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 IKBKEQ14164 716 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 KRT40Q6A162 431 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 B3GNT9Q6UX72 402 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 SLC17A8Q8NDX2 589 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 DBF4BQ8NFT6 615 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 ZNF576Q9H609 170 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 GABBR1Q9UBS5 961 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 PCDHA2Q9Y5H9 948 aa22.95■■□□□ 1.26
GTF3A-202ENST00000419181 ZBTB42B2RXF5 422 aa22.94■■□□□ 1.26
GTF3A-202ENST00000419181 CHMP2AO43633 222 aa22.94■■□□□ 1.26
GTF3A-202ENST00000419181 MKRN4PQ13434 485 aaPredicted RBP22.94■■□□□ 1.26
GTF3A-202ENST00000419181 TRIM29Q14134 588 aa22.94■■□□□ 1.26
GTF3A-202ENST00000419181 MTHFD1LQ6UB35 978 aa22.94■■□□□ 1.26
GTF3A-202ENST00000419181 HERC6Q8IVU3 1022 aa22.94■■□□□ 1.26
GTF3A-202ENST00000419181 DIS3L2Q8IYB7 885 aaKnown RBP22.94■■□□□ 1.26
GTF3A-202ENST00000419181 BBXQ8WY36 941 aaPredicted RBP22.94■■□□□ 1.26
GTF3A-202ENST00000419181 KCNMB3Q9NPA1 279 aa22.94■■□□□ 1.26
GTF3A-202ENST00000419181 BTBD18B2RXH4 712 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 CCNT1O60563 726 aaKnown RBP22.93■■□□□ 1.26
GTF3A-202ENST00000419181 MYOGP15173 224 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 FOSBP53539 338 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 DEFB103AP81534 67 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 ZNF484Q5JVG2 852 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 CKAP2LQ8IYA6 745 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 IL27Q8NEV9 243 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 RDM1Q8NG50 284 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 TBC1D32Q96NH3 1257 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 NAP1L4Q99733 375 aaKnown RBP22.93■■□□□ 1.26
GTF3A-202ENST00000419181 FAM49AQ9H0Q0 323 aaPredicted RBP22.93■■□□□ 1.26
GTF3A-202ENST00000419181 NKX2-4Q9H2Z4 354 aa22.93■■□□□ 1.26
GTF3A-202ENST00000419181 SMIM35A0A1B0GVV1 85 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 ST18O60284 1047 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 ZNF862O60290 1169 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 KLRC1P26715 233 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 MRPS6P82932 125 aaKnown RBP22.92■■□□□ 1.26
GTF3A-202ENST00000419181 GRIN2CQ14957 1233 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 MYLIPQ8WY64 445 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 SEPT8Q92599 483 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 SLC28A3Q9HAS3 691 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 CDY2AQ9Y6F7 541 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 CHD7Q9P2D1 2997 aa22.92■■□□□ 1.26
GTF3A-202ENST00000419181 EVPLQ92817 2033 aa22.91■■□□□ 1.26
GTF3A-202ENST00000419181 HMGN5P82970 282 aaKnown RBP22.91■■□□□ 1.26
GTF3A-202ENST00000419181 UGCGQ16739 394 aa22.91■■□□□ 1.26
GTF3A-202ENST00000419181 MIER3Q7Z3K6 550 aa22.91■■□□□ 1.26
GTF3A-202ENST00000419181 FAM167AQ96KS9 214 aa22.91■■□□□ 1.26
GTF3A-202ENST00000419181 FAM20AQ96MK3 541 aa22.91■■□□□ 1.26
GTF3A-202ENST00000419181 IFIH1Q9BYX4 1025 aaKnown RBP22.91■■□□□ 1.26
GTF3A-202ENST00000419181 MYO9BQ13459 2157 aa22.91■■□□□ 1.26
GTF3A-202ENST00000419181 TBX3O15119 743 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 GHRP10912 638 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 PRKCEQ02156 737 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 LPIN1Q14693 890 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 FBXO47Q5MNV8 452 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 IER5Q5VY09 327 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 TMCO2Q7Z6W1 182 aaPredicted RBP22.9■■□□□ 1.26
GTF3A-202ENST00000419181 POTEDQ86YR6 584 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 HAS1Q92839 578 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 APBB2Q92870 758 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 C8orf76Q96K31 380 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 VAV3Q9UKW4 847 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 LOXHD1Q8IVV2 1947 aa22.9■■□□□ 1.26
GTF3A-202ENST00000419181 C22orf31O95567 290 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 OATP04181 439 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 CA3P07451 260 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 FOSL2P15408 326 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 GUCY1B3Q02153 619 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms