RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 MAGEB2O15479 319 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 CKBP12277 381 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 ACTN1P12814 892 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 CSF2RAP15509 400 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 THPOP40225 353 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 QARSP47897 775 aaKnown RBP22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 ZNF200P98182 395 aaPredicted RBP22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 ZNF174Q15697 407 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 XKR3Q5GH77 459 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 LRRC8DQ7L1W4 858 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 ERMNQ8TAM6 284 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 MTMR9Q96QG7 549 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 VAV3Q9UKW4 847 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 PCDHA2Q9Y5H9 948 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 IGSF9BQ9UPX0 1349 aa22.28■■□□□ 1.16
RPUSD3-202ENST00000418713 RSPH10B2B2RC85 870 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 KIF28PB7ZC32 967 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 M0QZ92 97 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 FGBP02675 491 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 OATP04181 439 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 OR52Z1P0C646 297 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 RSPH10BP0C881 870 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 IGBP1P78318 339 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 FAM43BQ6ZT52 329 aaPredicted RBP22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 OTUD6AQ7L8S5 288 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 GJA10Q969M2 543 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 PPME1Q9Y570 386 aa22.27■■□□□ 1.16
RPUSD3-202ENST00000418713 VPS37CA5D8V6 355 aaPredicted RBP22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 BMP15O95972 392 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 TMOD1P28289 359 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 BECN1Q14457 450 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 IER5Q5VY09 327 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 NCAPH2Q6IBW4 605 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 CTAGE1Q96RT6 745 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 JPH2Q9BR39 696 aaPredicted RBP22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 WNT8AQ9H1J5 351 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 ZSWIM4Q9H7M6 989 aa22.26■■□□□ 1.15
RPUSD3-202ENST00000418713 DNAH12Q6ZR08 3092 aa22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 SMIM35A0A1B0GVV1 85 aa22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 SYT1P21579 422 aa22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 PRKCEQ02156 737 aa22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 MTHFD1LQ6UB35 978 aa22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 NIFKQ9BYG3 293 aaKnown RBP22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 FTOQ9C0B1 505 aaKnown RBP eCLIP22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 ZSCAN16Q9H4T2 348 aaPredicted RBP22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 TRIP12Q14669 1992 aaPredicted RBP22.25■■□□□ 1.15
RPUSD3-202ENST00000418713 LTBP2Q14767 1821 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 ATP4AP20648 1035 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 KLRC1P26715 233 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 CDC42EP1Q00587 391 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 PDIA5Q14554 519 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 TRIM71Q2Q1W2 868 aaKnown RBP22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 HABP4Q5JVS0 413 aaKnown RBP22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 ZNF618Q5T7W0 954 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 C4orf19Q8IY42 314 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 DHX38Q92620 1227 aaKnown RBP22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 SCLYQ96I15 445 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 UMODL1Q5DID0 1318 aa22.24■■□□□ 1.15
RPUSD3-202ENST00000418713 DDX11L8A8MPP1 907 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 EML1O00423 815 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 EFCAB14O75071 495 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 PRPHP41219 470 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 HIC1Q14526 733 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 LRIT3Q3SXY7 679 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 MARCH8Q5T0T0 291 aa22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 RNPC3Q96LT9 517 aaKnown RBP22.23■■□□□ 1.15
RPUSD3-202ENST00000418713 STX6O43752 255 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 XRCC6P12956 609 aaKnown RBP eCLIP22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 TECP42680 631 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 DNM2P50570 870 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 TOB1P50616 345 aaPredicted RBP22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 SPIRE1Q08AE8 756 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 TBC1D8BQ0IIM8 1120 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 PTGDRQ13258 359 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 FAM26DQ5JW98 314 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 TMEM240Q5SV17 173 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 ODR4Q5SWX8 454 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 HAUS3Q68CZ6 603 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 DTHD1Q6ZMT9 781 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 ZNF365Q70YC5 407 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 TRMT1LQ7Z2T5 733 aaKnown RBP22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 BANK1Q8NDB2 785 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 TMEM60Q9H2L4 133 aa22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 SEPT9Q9UHD8 586 aaPredicted RBP22.22■■□□□ 1.15
RPUSD3-202ENST00000418713 MUTP22033 750 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 FXR2P51116 673 aaKnown RBP eCLIP22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 SHHQ15465 462 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 ARL6IP4Q66PJ3 421 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 DEFB128Q7Z7B8 93 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 TPH2Q8IWU9 490 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 USP38Q8NB14 1042 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 DNAJB3Q8WWF6 145 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 HERVK_113Q902F9 699 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 CCDC43Q96MW1 224 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 MAP7D2Q96T17 732 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 EIF2AK1Q9BQI3 630 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.21■■□□□ 1.158e-7■■■■■ 32.7
RPUSD3-202ENST00000418713 LXNQ9BS40 222 aa22.21■■□□□ 1.15
RPUSD3-202ENST00000418713 FOXD4L1Q9NU39 408 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms