RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 E7ENQ6 273 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 O00370 1275 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 SUN1O94901 812 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ITGA4P13612 1032 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ATP6V1C1P21283 382 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 LCORLQ8N3X6 602 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 RASGEF1CQ8N431 466 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 METTL13Q8N6R0 699 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 LRRC57Q8N9N7 239 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ATP8B4Q8TF62 1192 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 EPAS1Q99814 870 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 WDR35Q9P2L0 1181 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 BCL9O00512 1426 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 FLT1P17948 1338 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ZNF831Q5JPB2 1677 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 RGS16O15492 202 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 MAP3K13O43283 966 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 RNF8O76064 485 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 NOL4O94818 638 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 AGTP01019 485 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 PLCG1P19174 1290 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ALDH3A1P30838 453 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 TUBP50607 506 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 PPP1R15BQ5SWA1 713 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 FAM83BQ5T0W9 1011 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 MAEAQ7L5Y9 396 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 ISCA1Q9BUE6 129 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 PLA2G12BQ9BX93 195 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 DPH5Q9H2P9 285 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 C2CD2Q9Y426 696 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 GJB6O95452 261 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 CCNB1P14635 433 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 GBP1P32455 592 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 SKIV2L2P42285 1042 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 IFNAR2P48551 515 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 RBM5P52756 815 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 IFI35P80217 286 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 POU5F1Q01860 360 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 NUGGCQ68CJ6 796 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 COL23A1Q86Y22 540 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 IFNL2Q8IZJ0 200 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 TBC1D16Q8TBP0 767 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 DCAF5Q96JK2 942 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PLCD4Q9BRC7 762 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ZMYND12Q9H0C1 365 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 TMEM60Q9H2L4 133 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 RXFP1Q9HBX9 757 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ADAMTS1Q9UHI8 967 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 THRAP3Q9Y2W1 955 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ATAD5Q96QE3 1844 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 DDAH1O94760 285 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PYGLP06737 847 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ADAM9Q13443 819 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PDIA5Q14554 519 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 CNGA2Q16280 664 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 DENND2CQ68D51 928 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ARAP2Q8WZ64 1704 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 HPS3Q969F9 1004 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 GORASP1Q9BQQ3 440 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 CELF4Q9BZC1 486 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 AZI2Q9H6S1 392 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 RNPEPL1Q9HAU8 725 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 SBF2Q86WG5 1849 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 CALML3P27482 149 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PMS2P54278 862 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PFKFB3Q16875 520 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 LRRC55Q6ZSA7 311 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 CROCCP2Q86T23 111 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 FITM2Q8N6M3 262 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 FBF1Q8TES7 1133 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 GOLPH3Q9H4A6 298 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ZDHHC18Q9NUE0 388 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 NKX1-2Q9UD57 310 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PNMA3Q9UL41 463 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 FAM205AQ6ZU69 1335 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 DUOX1Q9NRD9 1551 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 MYH14Q7Z406 1995 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 TTC36A6NLP5 189 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 CALB2P22676 271 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 PCK1P35558 622 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 LRRC63Q05C16 580 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 KCTD19Q17RG1 926 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 C10orf76Q5T2E6 689 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 C6orf118Q5T5N4 469 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 ARHGAP22Q7Z5H3 698 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 APBB1IPQ7Z5R6 666 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 BLIDQ8IZY5 108 aa8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 RAB3IPQ96QF0 476 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-202ENST00000418170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■□□ 18.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms