RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 DSTYKQ6XUX3 929 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 TRIM50Q86XT4 487 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 SLITRK6Q9H5Y7 841 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 TMEM206Q9H813 350 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 PPP1R18Q6NYC8 613 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 KSR1Q8IVT5 923 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 MIS12Q9H081 205 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 PARVGQ9HBI0 331 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 VGLL3A8MV65 326 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 KCNJ6P48051 423 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 ARHGAP4P98171 946 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 KCNV1Q6PIU1 500 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 DHTKD1Q96HY7 919 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-203ENST00000416188 PCIF1Q9H4Z3 704 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 RPF1Q9H9Y2 349 aaKnown RBP16.91■□□□□ 0.3
PHRF1-203ENST00000416188 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 OATP04181 439 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 PHKA2P46019 1235 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 GUCY2DQ02846 1103 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 KAZNQ674X7 775 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 GPC2Q8N158 579 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 GCNAQ96QF7 691 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 ATP6V0A4Q9HBG4 840 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 HOMER3Q9NSC5 361 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 STK17AQ9UEE5 414 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 RARBP10826 455 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 EEF1GP26641 437 aaKnown RBP16.91■□□□□ 0.3
PHRF1-203ENST00000416188 RBL2Q08999 1139 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 MESDQ14696 234 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 SWSAP1Q6NVH7 229 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 CLEC10AQ8IUN9 316 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 GRK7Q8WTQ7 553 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 PPP1R13BQ96KQ4 1090 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 MYL7Q01449 175 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-203ENST00000416188 PFKFB3Q16875 520 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-203ENST00000416188 CFAP57Q96MR6 1250 aa16.91■□□□□ 0.3
PHRF1-203ENST00000416188 ADGRB1O14514 1584 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 IKBKBO14920 756 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 POLR2BP30876 1174 aaKnown RBP16.9■□□□□ 0.3
PHRF1-203ENST00000416188 PTK2Q05397 1052 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 MYO1EQ12965 1108 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 BUB1BO60566 1050 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-203ENST00000416188 RNF8O76064 485 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 PLA2G4BP0C869 781 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 MMP14P50281 582 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 MAN1B1Q9UKM7 699 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 TYW5A2RUC4 315 aaKnown RBP16.9■□□□□ 0.3
PHRF1-203ENST00000416188 PRELPP51888 382 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 DDR1Q08345 913 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 ARHGAP24Q8N264 748 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 BANK1Q8NDB2 785 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 EPSTI1Q96J88 318 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 CDC23Q9UJX2 597 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 PCDHB6Q9Y5E3 794 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 GPR75-ASB3A0A0A6YYF3 556 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 THAP12O43422 761 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 FKBP3Q00688 224 aaKnown RBP16.9■□□□□ 0.3
PHRF1-203ENST00000416188 ZSCAN26Q16670 478 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 THNSL1Q8IYQ7 743 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 PSPC1Q8WXF1 523 aaKnown RBP16.9■□□□□ 0.3
PHRF1-203ENST00000416188 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
PHRF1-203ENST00000416188 CLIC2O15247 247 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 SARNPP82979 210 aaKnown RBP16.89■□□□□ 0.29
PHRF1-203ENST00000416188 BFSP1Q12934 665 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 CCDC13Q8IYE1 715 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 MCPH1Q8NEM0 835 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 GABBR1Q9UBS5 961 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
PHRF1-203ENST00000416188 SYNJ2BP-COX16A0A087WUM0 186 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 MYO1FO00160 1098 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 FAM186BQ8IYM0 893 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-203ENST00000416188 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-203ENST00000416188 SAMSN1Q9NSI8 373 aaKnown RBP16.89■□□□□ 0.29
PHRF1-203ENST00000416188 COX16Q9P0S2 106 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 BAIAP2L1Q9UHR4 511 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 SFNP31947 248 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 PEX3P56589 373 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 PIGOQ8TEQ8 1089 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 RICTORQ6R327 1708 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 USP32Q8NFA0 1604 aa16.89■□□□□ 0.29
PHRF1-203ENST00000416188 TOPORSQ9NS56 1045 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-203ENST00000416188 MAPK6Q16659 721 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 ZNF658Q5TYW1 1059 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-203ENST00000416188 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
PHRF1-203ENST00000416188 MTA3Q9BTC8 594 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 MSTO1Q9BUK6 570 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms