RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 IFNL2Q8IZJ0 200 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 TTLL6Q8N841 843 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 FLCNQ8NFG4 579 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 KISS1RQ969F8 398 aaPredicted RBP7.65□□□□□ -1.18
EPHA4-204ENST00000415749 EXOC2Q96KP1 924 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 CCDC140Q96MF4 163 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 CLUHP3Q96NS8 147 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 IPO9Q96P70 1041 aaKnown RBP7.65□□□□□ -1.18
EPHA4-204ENST00000415749 CDC6Q99741 560 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 DHRS4Q9BTZ2 278 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 PCDHA11Q9Y5I1 949 aa7.65□□□□□ -1.18
EPHA4-204ENST00000415749 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 KDM6AO15550 1401 aaPredicted RBP7.64□□□□□ -1.19
EPHA4-204ENST00000415749 RTL1A6NKG5 1358 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 INSRP06213 1382 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 WASH4PA8MWX3 477 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 POLRMTO00411 1230 aaKnown RBP7.64□□□□□ -1.19
EPHA4-204ENST00000415749 FYB1O15117 783 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 ZNF205O95201 554 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 MED26O95402 600 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 CD3EP07766 207 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 RAB27AP51159 221 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 BNIP3Q12983 259 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 DEFB115Q30KQ5 88 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 GTF2IRD2BQ6EKJ0 949 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 PPP4R4Q6NUP7 873 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 STRA8Q7Z7C7 330 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 GTF2IRD2Q86UP8 949 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 ASPSCR1Q9BZE9 553 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 FOXP3Q9BZS1 431 aa7.64□□□□□ -1.19
EPHA4-204ENST00000415749 GPR55Q9Y2T6 319 aaPredicted RBP7.64□□□□□ -1.19
EPHA4-204ENST00000415749 VAMP4O75379 141 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 DDNO94850 711 aaPredicted RBP7.63□□□□□ -1.19
EPHA4-204ENST00000415749 PHKG2P15735 406 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 CPEP16870 476 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 SDSP20132 328 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 HOXC12P31275 282 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 MAP2K1Q02750 393 aaPredicted RBP7.63□□□□□ -1.19
EPHA4-204ENST00000415749 ZP2Q05996 745 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 LRP8Q14114 963 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 DPY19L1Q2PZI1 675 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 DDX46Q7L014 1031 aaKnown RBP7.63□□□□□ -1.19
EPHA4-204ENST00000415749 LRRTM3Q86VH5 581 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 CHPFQ8IZ52 775 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 MYO1HQ8N1T3 1032 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 AGBL5Q8NDL9 886 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 BTN2A2Q8WVV5 523 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 EVI5LQ96CN4 794 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 CCDC120Q96HB5 630 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 MPHOSPH6Q99547 160 aaKnown RBP7.63□□□□□ -1.19
EPHA4-204ENST00000415749 NKX2-4Q9H2Z4 354 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 CARS2Q9HA77 564 aaKnown RBP7.63□□□□□ -1.19
EPHA4-204ENST00000415749 CYP26B1Q9NR63 512 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 MRPS23Q9Y3D9 190 aaKnown RBP7.63□□□□□ -1.19
EPHA4-204ENST00000415749 BACE2Q9Y5Z0 518 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 COMMD10Q9Y6G5 202 aa7.63□□□□□ -1.19
EPHA4-204ENST00000415749 PASKQ96RG2 1323 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 DNAJC25-GNG10A0A024R161 153 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 ERVV-2B6SEH9 535 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 H0YIN7 160 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 AURKAO14965 403 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 EYA4O95677 639 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 WNT11O96014 354 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 CPP00450 1065 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 GSTM1P09488 218 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 CD8BP10966 210 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 FGFR1P11362 822 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 NEK2P51955 445 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 HDAC1Q13547 482 aaPredicted RBP7.62□□□□□ -1.19
EPHA4-204ENST00000415749 SYCP2LQ5T4T6 812 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 LDHDQ86WU2 507 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 C2CD5Q86YS7 1000 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 KSR1Q8IVT5 923 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 LEO1Q8WVC0 666 aaPredicted RBP7.62□□□□□ -1.19
EPHA4-204ENST00000415749 SMAD5Q99717 465 aaKnown RBP7.62□□□□□ -1.19
EPHA4-204ENST00000415749 LGR4Q9BXB1 951 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 CARD11Q9BXL7 1154 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 SLC12A9Q9BXP2 914 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 ARNT2Q9HBZ2 717 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 ARHGEF4Q9NR80 690 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 ZIM2Q9NZV7 527 aa7.62□□□□□ -1.19
EPHA4-204ENST00000415749 WDR33Q9C0J8 1336 aaKnown RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 TRBV23-1A0A0A0MS06 115 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 STXBP3O00186 592 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 AKAP10O43572 662 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 FKTNO75072 461 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 MYL1P05976 194 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 SNRPB2P08579 225 aaKnown RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 RPL10P27635 214 aaKnown RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 CD96P40200 585 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 CRKLP46109 303 aaKnown RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 KCNJ6P48051 423 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 SEPHS1P49903 392 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 RBM10P98175 930 aaKnown RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 TEKQ02763 1124 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 STRN3Q13033 797 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 YOD1Q5VVQ6 348 aaPredicted RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 EEF1DP3Q658K8 133 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 KCTD13Q8WZ19 329 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms