RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, human

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN5A-204	ENST00000414099	USP44	Q9H0E7	712 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	COPG1	Q9Y678	874 aa	Known RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099		H3BRJ5	948 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	TTLL4	Q14679	1199 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	DARS2	Q6PI48	645 aa	Known RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	TRIM59	Q8IWR1	403 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	C2orf40	Q9H1Z8	148 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	DPYSL4	O14531	572 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAN2A1	Q16706	1144 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	PATL1	Q86TB9	770 aa	Known RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	CCNY	Q8ND76	341 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	MMTAG2	Q9BU76	263 aa	Known RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	GIMAP4	Q9NUV9	329 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	USP6	P35125	1406 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	RAD17	O75943	681 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	STXBP2	Q15833	593 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	VPS39	Q96JC1	886 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAP3K20	Q9NYL2	800 aa	Known RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	GCNT4	Q9P109	453 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	SORBS3	O60504	671 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	KRT4	P19013	534 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ATP1A2	P50993	1020 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	COPB1	P53618	953 aa	Known RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	GUCY2D	Q02846	1103 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	CYP4A11	Q02928	519 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	CRLF3	Q8IUI8	442 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	DBNDD1	Q9H9R9	158 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	CEP152	O94986	1710 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	KRT1	P04264	644 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	MYL3	P08590	195 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ADD2	P35612	726 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	FLOT2	Q14254	428 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	LRRC31	Q6UY01	552 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	SCG3	Q8WXD2	468 aa	Known RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	CAV1	Q03135	178 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	LRRC63	Q05C16	580 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	TRIM67	Q6ZTA4	783 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	CENPU	Q71F23	418 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ARHGEF25	Q86VW2	580 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	TUBGCP2	Q9BSJ2	902 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	RGS12	O14924	1447 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ZNF653	Q96CK0	615 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099		A0A1W2PQ27	194 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099		A0A1W2PQ64	194 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099		A0A1W2PQD8	194 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	MEIS1	O00470	390 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	USP17L2	Q6R6M4	530 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	GFM2	Q969S9	779 aa	Known RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	OTUB1	Q96FW1	271 aa	Predicted RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	CDC23	Q9UJX2	597 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ZNF18	P17022	549 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	PHKA1	P46020	1223 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	YWHAH	Q04917	246 aa	Predicted RBP	11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	KIAA1755	Q5JYT7	1200 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	SPOPL	Q6IQ16	392 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	SNX19	Q92543	992 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	RAB42	Q8N4Z0	105 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ARHGAP26	Q9UNA1	814 aa		11.41	□□□□□ -0.58
SCN5A-204	ENST00000414099	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	NLRP10	Q86W26	655 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	PALLD	Q8WX93	1383 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	KPNA7	A9QM74	516 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	GOLGA8H	P0CJ92	632 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	TMED2	Q15363	201 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	FBXO18	Q8NFZ0	1043 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	CAPN11	Q9UMQ6	739 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	PCDHB8	Q9UN66	801 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	PTPN22	Q9Y2R2	807 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	SYCE1L	A8MT33	242 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	SPAG7	O75391	227 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	PTK2B	Q14289	1009 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	PPP1R18	Q6NYC8	613 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	ACAD11	Q709F0	780 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	TADA2B	Q86TJ2	420 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	C7orf31	Q8N865	590 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	BEST2	Q8NFU1	509 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	N4BP2L2	Q92802	583 aa	Predicted RBP	11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	STRIP2	Q9ULQ0	834 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	FBXW4	P57775	412 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	GRAMD4	Q6IC98	578 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	PIDD1	Q9HB75	910 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	SUGT1	Q9Y2Z0	365 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	L3MBTL1	Q9Y468	752 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	SNX5	Q9Y5X3	404 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099		A0A0D9SFI3	127 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	GOLGA8J	A6NMD2	632 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	SERPING1	P05155	500 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	ETF1	P62495	437 aa	Known RBP	11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	HOMEZ	Q8IX15	550 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	TRMT44	Q8IYL2	757 aa	Known RBP	11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	MCU	Q8NE86	351 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	HEXIM2	Q96MH2	286 aa	Known RBP	11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	NLRP4	Q96MN2	994 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	ASPSCR1	Q9BZE9	553 aa		11.4	□□□□□ -0.58
SCN5A-204	ENST00000414099	YY1AP1	Q9H869	796 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms