RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 IRF2BPLQ9H1B7 796 aa11□□□□□ -0.65
RFFL-203ENST00000413582 IL25Q9H293 177 aa11□□□□□ -0.65
RFFL-203ENST00000413582 TMX1Q9H3N1 280 aa11□□□□□ -0.65
RFFL-203ENST00000413582 TLE6Q9H808 572 aa11□□□□□ -0.65
RFFL-203ENST00000413582 SENP2Q9HC62 589 aa11□□□□□ -0.65
RFFL-203ENST00000413582 TLR9Q9NR96 1032 aa11□□□□□ -0.65
RFFL-203ENST00000413582 TRPV2Q9Y5S1 764 aa11□□□□□ -0.65
RFFL-203ENST00000413582 IGSF9BQ9UPX0 1349 aa11□□□□□ -0.65
RFFL-203ENST00000413582 FSD2A1L4K1 749 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 PROB1E7EW31 1015 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 PIK3CDO00329 1044 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 MEIS2O14770 477 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 FSCN2O14926 492 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 IGBP1P78318 339 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 FOXK2Q01167 660 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 UBE3AQ05086 875 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 TROAPQ12815 778 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 PAK2Q13177 524 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 DUSP6Q16828 381 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 IER5Q5VY09 327 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 NLRX1Q86UT6 975 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
RFFL-203ENST00000413582 SMARCC2Q8TAQ2 1214 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 SEPT1Q8WYJ6 367 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 GLG1Q92896 1179 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 PCYT2Q99447 389 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 CDCA3Q99618 268 aaPredicted RBP10.99□□□□□ -0.65
RFFL-203ENST00000413582 SMARCAD1Q9H4L7 1026 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 PADI3Q9ULW8 664 aa10.99□□□□□ -0.65
RFFL-203ENST00000413582 H0Y858 1186 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 GALR2O43603 387 aaPredicted RBP10.98□□□□□ -0.65
RFFL-203ENST00000413582 PPFIA3O75145 1194 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 FGF18O76093 207 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 INSRRP14616 1297 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 ITGB5P18084 799 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 SARSP49591 514 aaKnown RBP10.98□□□□□ -0.65
RFFL-203ENST00000413582 NUBP1P53384 320 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 ERVFC1P60507 584 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 TMEM62Q0P6H9 643 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 KCNC3Q14003 757 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 PIBF1Q8WXW3 757 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 CUL5Q93034 780 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 CDHR1Q96JP9 859 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 RIPOR3Q96MK2 946 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 S1PR5Q9H228 398 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 OSBPL3Q9H4L5 887 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 KDM3AQ9Y4C1 1321 aa10.98□□□□□ -0.65
RFFL-203ENST00000413582 EP300Q09472 2414 aaPredicted RBP10.98□□□□□ -0.65
RFFL-203ENST00000413582 EVPLQ92817 2033 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 M0QZ92 97 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 HIP1O00291 1037 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 IFIT3O14879 490 aaKnown RBP10.97□□□□□ -0.65
RFFL-203ENST00000413582 MGEA5O60502 916 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 SP100P23497 879 aaPredicted RBP10.97□□□□□ -0.65
RFFL-203ENST00000413582 TMEM266Q2M3C6 531 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 ANKRD54Q6NXT1 300 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 SYCE2Q6PIF2 218 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 TMEM184AQ6ZMB5 413 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 MICAL1Q8TDZ2 1067 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 TRAPPC12Q8WVT3 735 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 CCDC136Q96JN2 1154 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
RFFL-203ENST00000413582 ERVK-5Q9HDB9 667 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 LRFN2Q9ULH4 789 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 PCDHA2Q9Y5H9 948 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 UBIAD1Q9Y5Z9 338 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 DMDP11532 3685 aa10.97□□□□□ -0.65
RFFL-203ENST00000413582 PRR23AA6NEV1 266 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 TBKBP1A7MCY6 615 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 IGHDP01880 384 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 SRGAP2BP0DMP2 458 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 IBSPP21815 317 aaPredicted RBP10.96□□□□□ -0.65
RFFL-203ENST00000413582 NBL1P41271 181 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 TECP42680 631 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 MTMR1Q13613 665 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 SPOUT1Q5T280 376 aaKnown RBP10.96□□□□□ -0.65
RFFL-203ENST00000413582 PLPP4Q5VZY2 271 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 PDE12Q6L8Q7 609 aaKnown RBP10.96□□□□□ -0.65
RFFL-203ENST00000413582 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 SMC5Q8IY18 1101 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 THNSL1Q8IYQ7 743 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 RASGRP4Q8TDF6 673 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 JPH1Q9HDC5 661 aaPredicted RBP10.96□□□□□ -0.65
RFFL-203ENST00000413582 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 CDH22Q9UJ99 828 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
RFFL-203ENST00000413582 SMIM35A0A1B0GVV1 85 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 ERICH2A1L162 156 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 CYP21A2P08686 494 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 KRT76Q01546 638 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 APOBRQ0VD83 1088 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms