RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 ZNF202O95125 648 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 STBD1O95210 358 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 RARBP10826 455 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 PLCG1P19174 1290 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 PTGS1P23219 599 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 CPT1AP50416 773 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 UGCGQ16739 394 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
HDAC9-206ENST00000413380 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 IQUBQ8NA54 791 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 BLOC1S4Q9NUP1 217 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 DDX19AQ9NUU7 478 aaKnown RBP12.99□□□□□ -0.33
HDAC9-206ENST00000413380 KIAA0100Q14667 2235 aaKnown RBP12.98□□□□□ -0.33
HDAC9-206ENST00000413380 DYNC1LI2O43237 492 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-206ENST00000413380 SLFN14P0C7P3 912 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 DGKDQ16760 1214 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 RRAGBQ5VZM2 374 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 FAM160B1Q5W0V3 765 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 LHX8Q68G74 356 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-206ENST00000413380 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 KCNK18Q7Z418 384 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 BANK1Q8NDB2 785 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 LENG1Q96BZ8 264 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-206ENST00000413380 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 NACC1Q96RE7 527 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDAC9-206ENST00000413380 AP5M1Q9H0R1 490 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 ZNF302Q9NR11 478 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 KBTBD4Q9NVX7 518 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 GABBR1Q9UBS5 961 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 DBR1Q9UK59 544 aaKnown RBP12.98□□□□□ -0.33
HDAC9-206ENST00000413380 SAMM50Q9Y512 469 aa12.98□□□□□ -0.33
HDAC9-206ENST00000413380 KPNA6O60684 536 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 F2P00734 622 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 LGALS2P05162 132 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 ATP4AP20648 1035 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 STAT6P42226 847 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 STAT5BP51692 787 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 SP4Q02446 784 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 CTTNQ14247 550 aaKnown RBP12.97□□□□□ -0.33
HDAC9-206ENST00000413380 FSCN1Q16658 493 aaKnown RBP12.97□□□□□ -0.33
HDAC9-206ENST00000413380 LONRF3Q496Y0 759 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-206ENST00000413380 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 TPH2Q8IWU9 490 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
HDAC9-206ENST00000413380 RAD54LQ92698 747 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 TNMDQ9H2S6 317 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 SMARCAD1Q9H4L7 1026 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 SPC25Q9HBM1 224 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 ANKEF1Q9NU02 776 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 KIAA1024Q9UPX6 916 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
HDAC9-206ENST00000413380 EVPLQ92817 2033 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-206ENST00000413380 HAS3O00219 553 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 SORBS3O60504 671 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 KINO60870 393 aaKnown RBP12.96□□□□□ -0.33
HDAC9-206ENST00000413380 EYA4O95677 639 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 MYL1P05976 194 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 CNGA1P29973 690 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 PRKCEQ02156 737 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 XKR3Q5GH77 459 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 PDILTQ8N807 584 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 SYT2Q8N9I0 419 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-206ENST00000413380 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 DHX58Q96C10 678 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 NIFKQ9BYG3 293 aaKnown RBP12.96□□□□□ -0.33
HDAC9-206ENST00000413380 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 ERAP1Q9NZ08 941 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 KCND2Q9NZV8 630 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
HDAC9-206ENST00000413380 MYADML2A6NDP7 307 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
HDAC9-206ENST00000413380 BACH1O14867 736 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 OATP04181 439 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 CCL5P13501 91 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 CAPN2P17655 700 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 YWHABP31946 246 aaKnown RBP12.95□□□□□ -0.34
HDAC9-206ENST00000413380 RARRES1P49788 294 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 PSMC6P62333 389 aa12.95□□□□□ -0.34
HDAC9-206ENST00000413380 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
HDAC9-206ENST00000413380 MDM2Q00987 491 aaPredicted RBP12.95□□□□□ -0.34
HDAC9-206ENST00000413380 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
HDAC9-206ENST00000413380 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms