RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 TRAPPC10P48553 1259 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 NDUFA8P51970 172 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PDE1BQ01064 536 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 RBL2Q08999 1139 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 CCNI2Q6ZMN8 369 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■■□□□ 12.7
PBRM1-209ENST00000412587 SPZ1Q9BXG8 430 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 KCND1Q9NSA2 647 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 ATXN10Q9UBB4 475 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 RAB21Q9UL25 225 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PCDHB13Q9Y5F0 798 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 COMMD10Q9Y6G5 202 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 E7ENQ6 273 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 M0QZ92 97 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 KDM1AO60341 852 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 OATP04181 439 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 S100BP04271 92 aaPredicted RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 FESP07332 822 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 SLC16A2P36021 539 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 KCTD2Q14681 263 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 RPS6KA1Q15418 735 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ASIC2Q16515 512 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 PPP2R5EQ16537 467 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 XKR9Q5GH70 373 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 GSTA5Q7RTV2 222 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 RBM12BQ8IXT5 1001 aaKnown RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 MYOCDQ8IZQ8 938 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 PNKPQ96T60 521 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 TRIM31Q9BZY9 425 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NDEL1Q9GZM8 345 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ETNK1Q9HBU6 452 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NDUFA13Q9P0J0 144 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 BCAP29Q9UHQ4 241 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ANO9A1A5B4 782 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ACADSP16219 412 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CDK8P49336 464 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NT5C2P49902 561 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 SLC9C1Q4G0N8 1177 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 PIP4K2CQ8TBX8 421 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CNGB3Q9NQW8 809 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NDC80O14777 642 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 AP5Z1O43299 807 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 GHRP10912 638 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ATP1A3P13637 1013 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 LONP1P36776 959 aaKnown RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CCNA1P78396 465 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 KPNB1Q14974 876 aaKnown RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CLUL1Q15846 466 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 MIGA2Q7L4E1 593 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 RTEL1Q9NZ71 1219 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CLIC4Q9Y696 253 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 SPATA31A1Q5TZJ5 1347 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 SEC24CP53992 1094 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 CYP4A11Q02928 519 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 RDH13Q8NBN7 331 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 RASGRP4Q8TDF6 673 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 WDR60Q8WVS4 1066 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 PIGSQ96S52 555 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NUF2Q9BZD4 464 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 FAM192AQ9GZU8 254 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 TAF1DQ9H5J8 278 aaPredicted RBP9.17□□□□□ -0.94
PBRM1-209ENST00000412587 NFU1Q9UMS0 254 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 PCDHA4Q9UN74 947 aa9.17□□□□□ -0.94
PBRM1-209ENST00000412587 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 ECEL1O95672 775 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 PYGLP06737 847 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 STMN1P16949 149 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 AARSP49588 968 aaKnown RBP eCLIP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SLC39A14Q15043 492 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 FAM102BQ5T8I3 360 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 MARCH10Q8NA82 808 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 TRAPPC9Q96Q05 1148 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 A0A087WWV3 80 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SPOPO43791 374 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SLC7A5Q01650 507 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 KIF22Q14807 665 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SPATA1Q5VX52 437 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 DGKHQ86XP1 1220 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 FAM178BQ8IXR5 827 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SH2D3CQ8N5H7 860 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 METTL13Q8N6R0 699 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 LRRN4CLQ8ND94 238 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 KRT12Q99456 494 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 TBC1D23Q9NUY8 699 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 GGA2Q9UJY4 613 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 UBN2Q6ZU65 1347 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 MAPK13O15264 365 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 ADCY3O60266 1144 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms