RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 PHKBQ93100 1093 aa18.82■□□□□ 0.6
SCAMP4-203ENST00000411971 JAKMIP1Q96N16 626 aaKnown RBP18.82■□□□□ 0.6
SCAMP4-203ENST00000411971 TMX1Q9H3N1 280 aa18.82■□□□□ 0.6
SCAMP4-203ENST00000411971 TRPC6Q9Y210 931 aa18.82■□□□□ 0.6
SCAMP4-203ENST00000411971 NID2Q14112 1375 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 ADGRA3Q8IWK6 1321 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 RRN3P2A6NIE6 340 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 FOSP01100 380 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 SCG2P13521 617 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 METAP2P50579 478 aaKnown RBP eCLIP18.81■□□□□ 0.64e-7■■□□□ 12
SCAMP4-203ENST00000411971 AP3B2Q13367 1082 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 TMEM266Q2M3C6 531 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 MTHFD1LQ6UB35 978 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 PLA2G4DQ86XP0 818 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 FIBCD1Q8N539 461 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 IL17RAQ96F46 866 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 SAMD11Q96NU1 681 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 AGXT2Q9BYV1 514 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 C11orf16Q9NQ32 467 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 PCDHA2Q9Y5H9 948 aa18.81■□□□□ 0.6
SCAMP4-203ENST00000411971 POTEB3A0JP26 581 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 H3BQ06 376 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 hCG_1984214I3L0E3 225 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 DGKIO75912 1065 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 CTNNB1P35222 781 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 CAMK1Q14012 370 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 KRT32Q14532 448 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 LEXMQ3ZCV2 418 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 POTEBQ6S5H4 581 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 ZNF713Q8N859 430 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 BANK1Q8NDB2 785 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 TMEM40Q8WWA1 233 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 ZMYND12Q9H0C1 365 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 AZI2Q9H6S1 392 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 PADI3Q9ULW8 664 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 TRPV2Q9Y5S1 764 aa18.8■□□□□ 0.6
SCAMP4-203ENST00000411971 IGSF9BQ9UPX0 1349 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 C5orf67F2Z3F1 127 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 MGEA5O60502 916 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 CSPG5O95196 566 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 CYP3A4P08684 503 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 KLRC1P26715 233 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 BMPR1AP36894 532 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 RCAN1P53805 252 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 COL19A1Q14993 1142 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 NIPA1Q7RTP0 329 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 RSPH3Q86UC2 560 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 NEK9Q8TD19 979 aa18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 CLP1Q92989 425 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 CELF4Q9BZC1 486 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 NCOA5Q9HCD5 579 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 MRPL42Q9Y6G3 142 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-203ENST00000411971 SMIM35A0A1B0GVV1 85 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 RPS6KB1P23443 525 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 DNAJB1P25685 340 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 ZNF76P36508 570 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 LTBRP36941 435 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 SWSAP1Q6NVH7 229 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 KIAA0319LQ8IZA0 1049 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 LENG9Q96B70 501 aa18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 NOC2LQ9Y3T9 749 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-203ENST00000411971 IPO5O00410 1097 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 PRPF3O43395 683 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 TRMT1LQ7Z2T5 733 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 GJA10Q969M2 543 aa18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 PPP1R16BQ96T49 567 aa18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 ALG13Q9NP73 1137 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 HCSTQ9UBK5 93 aa18.77■□□□□ 0.6
SCAMP4-203ENST00000411971 KDM3AQ9Y4C1 1321 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 FAM86C2PA6NEL3 165 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 GRXCR2A6NFK2 248 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 BACH1O14867 736 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 HMGB1P09429 215 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 CCT2P78371 535 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 TOB2Q14106 344 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 BTG3Q14201 252 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 PTPROQ16827 1216 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 PAN2Q504Q3 1202 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 IER5Q5VY09 327 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 PTCRAQ6ISU1 281 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 TEX2Q8IWB9 1127 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 FBXL16Q8N461 479 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 ERVK-5Q9HDB9 667 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 ZNF302Q9NR11 478 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 VPS54Q9P1Q0 977 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 SQORQ9Y6N5 450 aa18.76■□□□□ 0.59
SCAMP4-203ENST00000411971 LINC01565O15544 149 aa18.75■□□□□ 0.59
SCAMP4-203ENST00000411971 HBP1O60381 514 aa18.75■□□□□ 0.59
SCAMP4-203ENST00000411971 DTNBO60941 627 aa18.75■□□□□ 0.59
SCAMP4-203ENST00000411971 C22orf31O95567 290 aa18.75■□□□□ 0.59
SCAMP4-203ENST00000411971 PDIA3P30101 505 aaKnown RBP18.75■□□□□ 0.59
SCAMP4-203ENST00000411971 FGD1P98174 961 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms