RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 CCDC43Q96MW1 224 aaKnown RBP18.27■□□□□ 0.52
LIMS2-208ENST00000410011 C8orf37Q96NL8 207 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 SPAG5Q96R06 1193 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 MRIQ9BWK5 157 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 DNAJC5Q9H3Z4 198 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.52
LIMS2-208ENST00000410011 TYW1Q9NV66 732 aaKnown RBP18.27■□□□□ 0.52
LIMS2-208ENST00000410011 FAM153AQ9UHL3 310 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 EPHA7Q15375 998 aa18.27■□□□□ 0.51
LIMS2-208ENST00000410011 NFIL3Q16649 462 aa18.27■□□□□ 0.51
LIMS2-208ENST00000410011 APOBEC3HQ6NTF7 200 aaKnown RBP18.27■□□□□ 0.51
LIMS2-208ENST00000410011 LRIG3Q6UXM1 1119 aa18.27■□□□□ 0.51
LIMS2-208ENST00000410011 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.51
LIMS2-208ENST00000410011 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 POTEIP0CG38 1075 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 SLC9A1P19634 815 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 CCT5P48643 541 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 CASP5P51878 434 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 JAM2P57087 298 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-208ENST00000410011 ARID5AQ03989 594 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 ALKBH5Q6P6C2 394 aaKnown RBP18.26■□□□□ 0.51
LIMS2-208ENST00000410011 POTEGQ6S5H5 508 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 IFT81Q8WYA0 676 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 LENG9Q96B70 501 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 HMGB1P1B2RPK0 211 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-208ENST00000410011 CCDC188H7C350 402 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 MPHOSPH10O00566 681 aaKnown RBP18.26■□□□□ 0.51
LIMS2-208ENST00000410011 RAD51CO43502 376 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 SREBF1P36956 1147 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 VPS36Q86VN1 386 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 BBXQ8WY36 941 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-208ENST00000410011 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 REEP2Q9BRK0 252 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 POLR3CQ9BUI4 534 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-208ENST00000410011 PLEKHA4Q9H4M7 779 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
LIMS2-208ENST00000410011 PPEF1O14829 653 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-208ENST00000410011 KRT14P02533 472 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 STAT3P40763 770 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 SLC15A2Q16348 729 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 B4GALNT4Q76KP1 1039 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 TADA2BQ86TJ2 420 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 RASGEF1CQ8N431 466 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 ZC3H12CQ9C0D7 883 aaKnown RBP18.25■□□□□ 0.51
LIMS2-208ENST00000410011 OLFML3Q9NRN5 406 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 SUCLA2Q9P2R7 463 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-208ENST00000410011 UBR3Q6ZT12 1888 aa18.25■□□□□ 0.51
LIMS2-208ENST00000410011 ZSCAN5CA6NGD5 496 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 KCNK3O14649 394 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 ACTN1P12814 892 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 TTC31Q49AM3 519 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 SLFN13Q68D06 897 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 SFR1Q86XK3 245 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 TPCN2Q8NHX9 752 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 SIX2Q9NPC8 291 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 PACSIN2Q9UNF0 486 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 AKAP3O75969 853 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 GAP43P17677 238 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 PSMC6P62333 389 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 SYCE1Q8N0S2 351 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 SLC35C1Q96A29 364 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 ATP6V1G3Q96LB4 118 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.51
LIMS2-208ENST00000410011 STXBP5LQ9Y2K9 1186 aa18.24■□□□□ 0.51
LIMS2-208ENST00000410011 ESYT3A0FGR9 886 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 NR3C1P04150 777 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 CYP3A4P08684 503 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 NOP2P46087 812 aaKnown RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 PRR16Q569H4 304 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 BORCS6Q96GS4 357 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 TTC7AQ9ULT0 858 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 DAAM1Q9Y4D1 1078 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 FAM169AQ9Y6X4 670 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 PGRMC1O00264 195 aaKnown RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 POLRMTO00411 1230 aaKnown RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 EIF3DO15371 548 aaKnown RBP eCLIP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 EYA4O95677 639 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 H2AFZP0C0S5 128 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 FERP16591 822 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 ECHS1P30084 290 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 PABPC4Q13310 644 aaKnown RBP eCLIP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 H2AFVQ71UI9 128 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 LRRC45Q96CN5 670 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 ZFP91Q96JP5 570 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 ZDHHC15Q96MV8 337 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
LIMS2-208ENST00000410011 ASTN1O14525 1302 aa18.23■□□□□ 0.51
LIMS2-208ENST00000410011 TATDN1Q6P1N9 297 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 FMNL3Q8IVF7 1028 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms