RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CYP3A7-CYP3A51PA0A087WV96 503 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 FDPSP14324 419 aaKnown RBP20.06■□□□□ 0.8
LSM5-204ENST00000409909 CYP3A7P24462 503 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 KRT76Q01546 638 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 LPIN1Q14693 890 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 PDXDC2PQ6P474 469 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 RSPH3Q86UC2 560 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 USP38Q8NB14 1042 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 ATP8B4Q8TF62 1192 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 SLC5A5Q92911 643 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
LSM5-204ENST00000409909 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 FAM49AQ9H0Q0 323 aaPredicted RBP20.06■□□□□ 0.8
LSM5-204ENST00000409909 PCDHA2Q9Y5H9 948 aa20.06■□□□□ 0.8
LSM5-204ENST00000409909 MAFBQ9Y5Q3 323 aaPredicted RBP20.06■□□□□ 0.8
LSM5-204ENST00000409909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.05■□□□□ 0.8
LSM5-204ENST00000409909 EPOPA6NHQ4 379 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 ZBTB42B2RXF5 422 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 RFXAPO00287 272 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 TDP2O95551 362 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 GHRP10912 638 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 MRPS6P82932 125 aaKnown RBP20.05■□□□□ 0.8
LSM5-204ENST00000409909 Q4G0T1 1027 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 MTHFD1LQ6UB35 978 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
LSM5-204ENST00000409909 GTF3C6Q969F1 213 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 RIT2Q99578 217 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 RAD9AQ99638 391 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 IFIH1Q9BYX4 1025 aaKnown RBP20.05■□□□□ 0.8
LSM5-204ENST00000409909 ORC3Q9UBD5 711 aaPredicted RBP20.05■□□□□ 0.8
LSM5-204ENST00000409909 PCDHA10Q9Y5I2 948 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 CDY2AQ9Y6F7 541 aa20.05■□□□□ 0.8
LSM5-204ENST00000409909 CUL9Q8IWT3 2517 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 HBP1O60381 514 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 AMHP03971 560 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 PSAPP07602 524 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 IGFBP4P22692 258 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 KLRC1P26715 233 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 NONOQ15233 471 aaKnown RBP eCLIP20.04■□□□□ 0.8
LSM5-204ENST00000409909 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 FBXO47Q5MNV8 452 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.04■□□□□ 0.8
LSM5-204ENST00000409909 MYOCDQ8IZQ8 938 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 OXER1Q8TDS5 423 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 MBOAT7Q96N66 472 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 MYH9P35579 1960 aaKnown RBP20.04■□□□□ 0.8
LSM5-204ENST00000409909 WDR81Q562E7 1941 aa20.04■□□□□ 0.8
LSM5-204ENST00000409909 TMEM62Q0P6H9 643 aa20.03■□□□□ 0.8
LSM5-204ENST00000409909 INF2Q27J81 1249 aa20.03■□□□□ 0.8
LSM5-204ENST00000409909 KRT25Q7Z3Z0 450 aa20.03■□□□□ 0.8
LSM5-204ENST00000409909 ARNTL2Q8WYA1 636 aa20.03■□□□□ 0.8
LSM5-204ENST00000409909 APBB2Q92870 758 aa20.03■□□□□ 0.8
LSM5-204ENST00000409909 GABBR1Q9UBS5 961 aa20.03■□□□□ 0.8
LSM5-204ENST00000409909 XIRP2A4UGR9 3374 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 SMIM35A0A1B0GVV1 85 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 WDR64B1ANS9 1081 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 GAS7O60861 476 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 PSMD10O75832 226 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 ST3GAL1Q11201 340 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 ZNF484Q5JVG2 852 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 LRCH2Q5VUJ6 765 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 IER5Q5VY09 327 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 TRMT1LQ7Z2T5 733 aaKnown RBP20.02■□□□□ 0.8
LSM5-204ENST00000409909 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 TOP1MTQ969P6 601 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 UNC45AQ9H3U1 944 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 AGO3Q9H9G7 860 aaKnown RBP20.02■□□□□ 0.8
LSM5-204ENST00000409909 DISC1Q9NRI5 854 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 TCEAL9Q9UHQ7 104 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 SAMM50Q9Y512 469 aa20.02■□□□□ 0.8
LSM5-204ENST00000409909 COL1A2P08123 1366 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 CHMP2AO43633 222 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 RPLP2P05387 115 aaKnown RBP20.01■□□□□ 0.79
LSM5-204ENST00000409909 XBP1P17861 261 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 HTRA4P83105 476 aaPredicted RBP20.01■□□□□ 0.79
LSM5-204ENST00000409909 EARS2Q5JPH6 523 aaKnown RBP20.01■□□□□ 0.79
LSM5-204ENST00000409909 MOXD1Q6UVY6 613 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 CKAP2LQ8IYA6 745 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 KIAA0319LQ8IZA0 1049 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 NSUN7Q8NE18 718 aaKnown RBP20.01■□□□□ 0.79
LSM5-204ENST00000409909 BBXQ8WY36 941 aaPredicted RBP20.01■□□□□ 0.79
LSM5-204ENST00000409909 PPM1EQ8WY54 764 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 KIF2CQ99661 725 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 TEKT3Q9BXF9 490 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 INSL6Q9Y581 213 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 EVPLQ92817 2033 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 LOXHD1Q8IVV2 1947 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 IGSF9BQ9UPX0 1349 aa20.01■□□□□ 0.79
LSM5-204ENST00000409909 PRRC2BQ5JSZ5 2229 aaKnown RBP20■□□□□ 0.79
LSM5-204ENST00000409909 SPTBN5Q9NRC6 3674 aaKnown RBP20■□□□□ 0.79
LSM5-204ENST00000409909 CCDC194A0A1B0GVG4 234 aa20■□□□□ 0.79
LSM5-204ENST00000409909 LINC01553A4QN01 128 aa20■□□□□ 0.79
LSM5-204ENST00000409909 SLC37A4O43826 429 aa20■□□□□ 0.79
LSM5-204ENST00000409909 ZNF862O60290 1169 aa20■□□□□ 0.79
LSM5-204ENST00000409909 JAK2O60674 1132 aa20■□□□□ 0.79
LSM5-204ENST00000409909 UPP2O95045 317 aa20■□□□□ 0.79
LSM5-204ENST00000409909 C22orf31O95567 290 aa20■□□□□ 0.79
LSM5-204ENST00000409909 CCDC85BQ15834 202 aaPredicted RBP20■□□□□ 0.79
LSM5-204ENST00000409909 UGCGQ16739 394 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms