RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 UBE2HP62256 183 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 MDM2Q00987 491 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 NBPF20Q3BBV1 942 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 FAM160B1Q5W0V3 765 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 RESP18Q5W5W9 173 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 ABHD15Q6UXT9 468 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 CABP7Q86V35 215 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 CALML4Q96GE6 196 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 EIF2AK1Q9BQI3 630 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 PYM1Q9BRP8 204 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 POLR3CQ9BUI4 534 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 NT5C3AQ9H0P0 336 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 AZI2Q9H6S1 392 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 DDX11L8A8MPP1 907 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 BACH1O14867 736 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 HOXD8P13378 290 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 RAG1P15918 1043 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 PTMSP20962 102 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 RPA1P27694 616 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 MCM4P33991 863 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 TCF7P36402 384 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 CCT6AP40227 531 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 SPECC1Q5M775 1068 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 NFRKBQ6P4R8 1299 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 SHC4Q6S5L8 630 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 KCTD17Q8N5Z5 321 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 RASSF8Q8NHQ8 419 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 MRPS27Q92552 414 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 ATP6V0A1Q93050 837 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 CDK5RAP3Q96JB5 506 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 TUFT1Q9NNX1 390 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 EMSYQ7Z589 1322 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 PP2D1A8MPX8 630 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 CDC25AP30304 524 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 QARSP47897 775 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 PTPN11Q06124 597 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 KAT2BQ92831 832 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 BADQ92934 168 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 EPSTI1Q96J88 318 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 HSD17B14Q9BPX1 270 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 UBE2OQ9C0C9 1292 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 ZNF302Q9NR11 478 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 TBX21Q9UL17 535 aa18.49■□□□□ 0.55
TSPAN4-208ENST00000409531 KAT6AQ92794 2004 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 SZT2Q5T011 3432 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 IGKV6D-21A0A0A0MT36 114 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 A0A1W2PPC1 479 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 B4GALT4O60513 344 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 LGR5O75473 907 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 TIMP1P01033 207 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 ITGB8P26012 769 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 SLC26A2P50443 739 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 PSMC5P62195 406 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 SWSAP1Q6NVH7 229 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 CCDC73Q6ZRK6 1079 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 FSIP1Q8NA03 581 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 GLG1Q92896 1179 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 DYDC2Q96IM9 177 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 MMTAG2Q9BU76 263 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 KATNAL1Q9BW62 490 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 TRPV6Q9H1D0 765 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 ZSWIM4Q9H7M6 989 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 LMBRD1Q9NUN5 540 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 GABBR1Q9UBS5 961 aa18.48■□□□□ 0.55
TSPAN4-208ENST00000409531 RANBP2P49792 3224 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 DLL1O00548 723 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 STAT5BP51692 787 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 CYP4A11Q02928 519 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 FAM47CQ5HY64 1035 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 HYIQ5T013 277 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 USP49Q70CQ1 688 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 PLPPR4Q7Z2D5 763 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 CATSPER3Q86XQ3 398 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 CCDC60Q8IWA6 550 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 TPH2Q8IWU9 490 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 LXNQ9BS40 222 aa18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 ZNF215Q9UL58 517 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 MAFBQ9Y5Q3 323 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-208ENST00000409531 IGSF9BQ9UPX0 1349 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 FAM237AA0A1B0GTK4 181 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 A0A1B0GVL5 298 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 HAS3O00219 553 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 MED24O75448 989 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 SLITRK3O94933 977 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 F2P00734 622 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 LGALS2P05162 132 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 SPATA31C1P0DKV0 1188 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 PFKFB1P16118 471 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 PSEN2P49810 448 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 CTTNQ14247 550 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 ZRSR1Q15695 479 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 UTP14CQ5TAP6 766 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms