RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 B4DLN1 442 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PDXKO00764 312 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CETN3O15182 167 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CHMP2AO43633 222 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 STAM2O75886 525 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 RPL13P26373 211 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 NF2P35240 595 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 KRT9P35527 623 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 FXR1P51114 621 aaKnown RBP eCLIP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MRPS9P82933 396 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 GOLGA8FQ08AF8 430 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 GOLGA8DPQ0D2H9 430 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ADAM9Q13443 819 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 DGKZQ13574 1117 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MTMR1Q13613 665 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PGM5Q15124 567 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MAN2A1Q16706 1144 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 KNOP1Q1ED39 458 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 VWA3BQ502W6 1294 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ZCWPW2Q504Y3 356 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 C9orf131Q5VYM1 1079 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CYP26C1Q6V0L0 522 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 STXBP4Q6ZWJ1 553 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 C1orf186Q6ZWK4 172 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 USP50Q70EL3 339 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 NLRX1Q86UT6 975 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 REXO1L1PQ8IX06 675 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 EFCAB3Q8N7B9 438 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 RDM1Q8NG50 284 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PIGOQ8TEQ8 1089 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 SCFD1Q8WVM8 642 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 UBE2Q2Q8WVN8 375 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 REEP2Q9BRK0 252 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PDCD2LQ9BRP1 358 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 NDST4Q9H3R1 872 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 AGO4Q9HCK5 861 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PXMP2Q9NR77 195 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 OLFML3Q9NRN5 406 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNHIT6Q9NWK9 470 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 TBC1D7Q9P0N9 293 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 TCEAL9Q9UHQ7 104 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ODF2LQ9ULJ1 636 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PPP2R2CQ9Y2T4 447 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 UQCRHLA0A096LP55 91 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 A0A1W2PQJ5 194 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 TTC26A0AVF1 554 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 DYNC1I1O14576 645 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CXCL11O14625 94 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CALUO43852 315 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 FAM13AO94988 1023 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 LYPLA2O95372 231 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 UQCRHP07919 91 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 NR3C2P08235 984 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CCDC175P0C221 793 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MYCLP12524 364 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 TRIM21P19474 475 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 EIF2AK2P19525 551 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CCND2P30279 289 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 SFNP31947 248 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 QARSP47897 775 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 JAK3P52333 1124 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PPP2R3AQ06190 1150 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PPATQ06203 517 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 RAD51AP2Q09MP3 1159 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PRKG1Q13976 671 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 VGLL4Q14135 290 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 TMEM132BQ14DG7 1078 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 BMT2Q1RMZ1 405 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MIIPQ5JXC2 388 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 LRRC55Q6ZSA7 311 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 EPM2AIP1Q7L775 607 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MYCT1Q8N699 235 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CHST13Q8NET6 341 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 EEF2KMTQ96G04 330 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 CDHR1Q96JP9 859 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PCMTD1Q96MG8 357 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 RUSC1Q9BVN2 902 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 EDEM3Q9BZQ6 932 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 KCTD10Q9H3F6 313 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ACAD9Q9H845 621 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 MRPL44Q9H9J2 332 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 PARVGQ9HBI0 331 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ABHD10Q9NUJ1 306 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF214Q9UL59 606 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 FAM184BQ9ULE4 1060 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 FZD1Q9UP38 647 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 TRAF3IP3Q9Y228 551 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 SAMM50Q9Y512 469 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 RIPK3Q9Y572 518 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 SNCAIPQ9Y6H5 919 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 ARHGEF35A5YM69 484 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms