RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 LY9Q9HBG7 655 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 K7ENM7 598 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PHKG2P15735 406 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 POLR2BP30876 1174 aaKnown RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 GARSP41250 739 aaKnown RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PDE1BQ01064 536 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 RPS6KA2Q15349 733 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PAPD7Q5XG87 772 aaKnown RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 CRLF3Q8IUI8 442 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 WDR75Q8IWA0 830 aaKnown RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 DNAJC10Q8IXB1 793 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PYROXD1Q8WU10 500 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 SNUPNO95149 360 aaKnown RBP19■□□□□ 0.63
SMPD4-202ENST00000409031 TTC4O95801 387 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 KCNA6P17658 529 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 KCNA3P22001 575 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 CTCFP49711 727 aaPredicted RBP19■□□□□ 0.63
SMPD4-202ENST00000409031 PDIK1LQ8N165 341 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 APOEP02649 317 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 ATP2C1P98194 919 aaPredicted RBP19■□□□□ 0.63
SMPD4-202ENST00000409031 DPYDQ12882 1025 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 ODR4Q5SWX8 454 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 ZC3H12CQ9C0D7 883 aaKnown RBP19■□□□□ 0.63
SMPD4-202ENST00000409031 MRPL47Q9HD33 250 aaKnown RBP19■□□□□ 0.63
SMPD4-202ENST00000409031 PRKAB2O43741 272 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 PRLRP16471 622 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 RFC4P35249 363 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 SLC12A2P55011 1212 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 MAP7D3Q8IWC1 876 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 ADSSL1Q8N142 457 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 PDZD8Q8NEN9 1154 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 MAD1L1Q9Y6D9 718 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 IGF2BP3O00425 579 aaKnown RBP eCLIP19■□□□□ 0.63
SMPD4-202ENST00000409031 AARSP49588 968 aaKnown RBP eCLIP19■□□□□ 0.63
SMPD4-202ENST00000409031 NT5C2P49902 561 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 YWHAEP62258 255 aaKnown RBP19■□□□□ 0.63
SMPD4-202ENST00000409031 NBPF3Q9H094 633 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 SENP1Q9P0U3 644 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 DLGAP2Q9P1A6 1054 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 GGT7Q9UJ14 662 aa19■□□□□ 0.63
SMPD4-202ENST00000409031 CCDC127Q96BQ5 260 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 FAM81BQ96LP2 452 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 SAYSD1Q9NPB0 183 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 AGPAT5Q9NUQ2 364 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 DCTN4Q9UJW0 460 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 GPC4O75487 556 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 GGPS1O95749 300 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 FOXR1Q6PIV2 292 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 OR2W6PQ8NHA6 318 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 NRBF2Q96F24 287 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 KDM4CQ9H3R0 1056 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 GREM2Q9H772 168 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 ACTN1P12814 892 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 SLC18A3Q16572 532 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 LCORLQ8N3X6 602 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 ANKRD27Q96NW4 1050 aa18.99■□□□□ 0.63
SMPD4-202ENST00000409031 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 STAM2O75886 525 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 FSBPO95073 299 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 PLEKHA8P1O95397 391 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 KIAA1755Q5JYT7 1200 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 CFAP69A5D8W1 941 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 CLIC2O15247 247 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 PRPF6O94906 941 aaKnown RBP18.98■□□□□ 0.63
SMPD4-202ENST00000409031 BSPRYQ5W0U4 402 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 MPHOSPH6Q99547 160 aaKnown RBP18.98■□□□□ 0.63
SMPD4-202ENST00000409031 MROH7-TTC4A0A0A0MT08 1334 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 RAD51CO43502 376 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 FOSP01100 380 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-202ENST00000409031 PLA2G4BP0C869 781 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 COPS2P61201 443 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 KCNH2Q12809 1159 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 ITIH4Q14624 930 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 PPP2R5DQ14738 602 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 NCAPHQ15003 741 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 TAB3Q8N5C8 712 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-202ENST00000409031 HAUS8Q9BT25 410 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 FAM96AQ9H5X1 160 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 ZFATQ9P243 1243 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 TRPC6Q9Y210 931 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
SMPD4-202ENST00000409031 hCG_2014768A0A024R1R8 64 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 EPHA10Q5JZY3 1008 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 TTBK2Q6IQ55 1244 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 RNF207Q6ZRF8 634 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 SDCCAG3Q96C92 435 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 UBE2TQ9NPD8 197 aaPredicted RBP18.97■□□□□ 0.63
SMPD4-202ENST00000409031 ZNF711Q9Y462 761 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 FDPSP14324 419 aaKnown RBP18.97■□□□□ 0.63
SMPD4-202ENST00000409031 TMPRSS15P98073 1019 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 CYP4A11Q02928 519 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 ALX1Q15699 326 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 TTC17Q96AE7 1141 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 TRIM56Q9BRZ2 755 aaKnown RBP18.97■□□□□ 0.63
SMPD4-202ENST00000409031 ANLNQ9NQW6 1124 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 PITPNM2Q9BZ72 1349 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 IGKV5-2P06315 115 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 CCDC137Q6PK04 289 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms