RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 APBB2Q92870 758 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 TOP1MTQ969P6 601 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 AIFM3Q96NN9 605 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 GTPBP6O43824 516 aaPredicted RBP21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 MRPS6P82932 125 aaKnown RBP21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 TMEM62Q0P6H9 643 aa21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 FBXO47Q5MNV8 452 aa21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 SWSAP1Q6NVH7 229 aa21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 GDPD5Q8WTR4 605 aa21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 PCDHA2Q9Y5H9 948 aa21.89■■□□□ 1.09
SMARCB1-204ENST00000407422 ATP4AP20648 1035 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 SLC26A2P50443 739 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 ERVK-21P61565 698 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 FAM160B1Q5W0V3 765 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 MIS18BP1Q6P0N0 1132 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 TNPO1Q92973 898 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 TGS1Q96RS0 853 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 SUGCTQ9HAC7 445 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 ZNF302Q9NR11 478 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 TBC1D22BQ9NU19 505 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 THEGQ9P2T0 379 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 DTNBO60941 627 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 DEXIO95424 95 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 PDXDC2PQ6P474 469 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 MTHFD1LQ6UB35 978 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 ATP8B4Q8TF62 1192 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 AGO3Q9H9G7 860 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 PCDHA4Q9UN74 947 aa21.88■■□□□ 1.09
SMARCB1-204ENST00000407422 SCRN1Q12765 414 aa21.87■■□□□ 1.09
SMARCB1-204ENST00000407422 TJAP1Q5JTD0 557 aa21.87■■□□□ 1.09
SMARCB1-204ENST00000407422 ZNF746Q6NUN9 644 aaPredicted RBP21.87■■□□□ 1.09
SMARCB1-204ENST00000407422 SP7Q8TDD2 431 aaPredicted RBP21.87■■□□□ 1.09
SMARCB1-204ENST00000407422 YME1L1Q96TA2 773 aa21.87■■□□□ 1.09
SMARCB1-204ENST00000407422 C17orf80Q9BSJ5 609 aa21.87■■□□□ 1.09
SMARCB1-204ENST00000407422 TTC3P53804 2025 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 ZBTB42B2RXF5 422 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 HBP1O60381 514 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 KLRC1P26715 233 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 NPY5RQ15761 445 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 IER5Q5VY09 327 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 TSHZ1Q6ZSZ6 1077 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 TRMT1LQ7Z2T5 733 aaKnown RBP21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 TBCKQ8TEA7 893 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 ATXN2LQ8WWM7 1075 aaKnown RBP21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 TPCN1Q9ULQ1 816 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 BRWD1Q9NSI6 2320 aa21.86■■□□□ 1.09
SMARCB1-204ENST00000407422 NLRC5Q86WI3 1866 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 SMIM35A0A1B0GVV1 85 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 M0R2N6 131 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 MSH4O15457 936 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 CD52P31358 61 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 USP11P51784 963 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 CPLX2Q6PUV4 134 aaKnown RBP21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 GJA10Q969M2 543 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 MAFBQ9Y5Q3 323 aaPredicted RBP21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 TRPV2Q9Y5S1 764 aa21.85■■□□□ 1.09
SMARCB1-204ENST00000407422 ENPP3O14638 875 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 RPLP2P05387 115 aaKnown RBP21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 KRT76Q01546 638 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 SKIV2LQ15477 1246 aaKnown RBP21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 CKAP2LQ8IYA6 745 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 SMAP1Q8IYB5 467 aaPredicted RBP21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 BLIDQ8IZY5 108 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 ASB2Q96Q27 587 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 PCDHA10Q9Y5I2 948 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 NCOR1O75376 2440 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 ANAPC15P60006 121 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 TFF2Q03403 129 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 CELF4Q9BZC1 486 aaKnown RBP21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 SLKQ9H2G2 1235 aaPredicted RBP21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 GABBR1Q9UBS5 961 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 TCEAL9Q9UHQ7 104 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 KCNJ14Q9UNX9 436 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 SAMM50Q9Y512 469 aa21.84■■□□□ 1.09
SMARCB1-204ENST00000407422 TCF20Q9UGU0 1960 aaKnown RBP21.83■■□□□ 1.09
SMARCB1-204ENST00000407422 M0QZ92 97 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 PSAPP07602 524 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 MRPS5P82675 430 aaKnown RBP21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 ZNF484Q5JVG2 852 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 KIAA0319LQ8IZA0 1049 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 DAGLBQ8NCG7 672 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 LINC01599Q8WXQ3 324 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 SYMPKQ92797 1274 aaKnown RBP21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 TSPYL2Q9H2G4 693 aaPredicted RBP21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 COL1A2P08123 1366 aa21.83■■□□□ 1.08
SMARCB1-204ENST00000407422 PFKFB2O60825 505 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 TDP2O95551 362 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 AK2P54819 239 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 RTN4RL1Q86UN2 441 aaPredicted RBP21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 NME8Q8N427 588 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 FBXO22Q8NEZ5 403 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 BBXQ8WY36 941 aaPredicted RBP21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 SLC5A5Q92911 643 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 CDHR5Q9HBB8 845 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 GJB4Q9NTQ9 266 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 PADI3Q9ULW8 664 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 SQORQ9Y6N5 450 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 IGSF9BQ9UPX0 1349 aa21.82■■□□□ 1.08
SMARCB1-204ENST00000407422 CHMP2AO43633 222 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 TMEM266Q2M3C6 531 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms