RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 A0A1W2PQ45 241 aaPredicted RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 A0A1W2PQY0 241 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 LRRC10BA6NIK2 292 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 PSMA7O14818 248 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 ATP2A1O14983 1001 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 ZBTB5O15062 677 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 CCNT1O60563 726 aaKnown RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 IGHA2P01877 340 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 ICAM1P05362 532 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 OAZ1P54368 228 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 PDIA5Q14554 519 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 SNRNP48Q6IEG0 339 aaKnown RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 KLHL10Q6JEL2 608 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 CABP7Q86V35 215 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 DHTKD1Q96HY7 919 aaPredicted RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 MAML3Q96JK9 1138 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 PPP1R13BQ96KQ4 1090 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 AGBL1Q96MI9 1066 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 PIGSQ96S52 555 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 PBX4Q9BYU1 374 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 TRMT1Q9NXH9 659 aaKnown RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 MAGEC2Q9UBF1 373 aaPredicted RBP14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 CDH23Q9H251 3354 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 ZNF536O15090 1300 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 PHLPP2Q6ZVD8 1323 aa14.36□□□□□ -0.11
SMARCB1-203ENST00000407082 FGFR1OPO95684 399 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 FCER1AP12319 257 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 FAAP100Q0VG06 881 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 LETM2Q2VYF4 491 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 E4F1Q66K89 784 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 VTI1AQ96AJ9 217 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 IQCDQ96DY2 449 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 MTMR8Q96EF0 704 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 MROH8Q9H579 483 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 THAP9Q9H5L6 903 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 STARD7Q9NQZ5 370 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 SAMSN1Q9NSI8 373 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 KBTBD4Q9NVX7 518 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 CGNQ9P2M7 1197 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 MSRAQ9UJ68 235 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 CCPG1Q9ULG6 757 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 CTNND2Q9UQB3 1225 aa14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 COL11A1P12107 1806 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-203ENST00000407082 SMCHD1A6NHR9 2005 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 RHOBTB3O94955 611 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 SLU7O95391 586 aaKnown RBP14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 SLC25A27O95847 323 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 TIMP1P01033 207 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 ACRP10323 421 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 ALAS1P13196 640 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 ETF1P62495 437 aaKnown RBP14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 RBM10P98175 930 aaKnown RBP14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.112e-8■■□□□ 13.4
SMARCB1-203ENST00000407082 ADGRE1Q14246 886 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 IL17AQ16552 155 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 USH1GQ495M9 461 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 COBLL1Q53SF7 1204 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 CNNM4Q6P4Q7 775 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 FBXO11Q86XK2 927 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 SHCBP1Q8NEM2 672 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 NELFBQ8WX92 580 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 CUL5Q93034 780 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 LENG1Q96BZ8 264 aaPredicted RBP14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 C7orf25Q9BPX7 421 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 HOMER2Q9NSB8 354 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
SMARCB1-203ENST00000407082 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 WNT7AO00755 349 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 N4BP3O15049 544 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 PGK2P07205 417 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TAL1P17542 331 aaPredicted RBP14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 COPB2P35606 906 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 ACLYP53396 1101 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TUBB2AQ13885 445 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 KARSQ15046 597 aaKnown RBP14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 CALCRLQ16602 461 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TKFCQ3LXA3 575 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TMEM240Q5SV17 173 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 SV2BQ7L1I2 683 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 IGSF22Q8N9C0 903 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 RASGRP4Q8TDF6 673 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms