RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ZNF214Q9UL59 606 aaPredicted RBP27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 FAM184BQ9ULE4 1060 aa27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 EIF3DO15371 548 aaKnown RBP eCLIP27.2■■□□□ 1.94
DNMT3A-206ENST00000406659 TMEM132BQ14DG7 1078 aa27.2■■□□□ 1.94
DNMT3A-206ENST00000406659 NEK11Q8NG66 645 aa27.2■■□□□ 1.94
DNMT3A-206ENST00000406659 RBM46Q8TBY0 533 aaKnown RBP27.2■■□□□ 1.94
DNMT3A-206ENST00000406659 ERO1AQ96HE7 468 aa27.2■■□□□ 1.94
DNMT3A-206ENST00000406659 BCAS3Q9H6U6 928 aa27.2■■□□□ 1.94
DNMT3A-206ENST00000406659 COL11A1P12107 1806 aaPredicted RBP27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 ATP2A1O14983 1001 aa27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 GUCY2CP25092 1073 aa27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 RPL13P26373 211 aaKnown RBP27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 SH3D19Q5HYK7 790 aa27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 TEX13BQ9BXU2 312 aa27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 TCEAL9Q9UHQ7 104 aa27.19■■□□□ 1.94
DNMT3A-206ENST00000406659 A0A0U1RQJ8 604 aa27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 TESPA1A2RU30 521 aaPredicted RBP27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 CYLC1P35663 651 aaPredicted RBP27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 STXBP4Q6ZWJ1 553 aa27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 SULF1Q8IWU6 871 aa27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 SMCR8Q8TEV9 937 aaPredicted RBP27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 ATRIPQ8WXE1 791 aa27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 MYPNQ86TC9 1320 aa27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 LOXHD1Q8IVV2 1947 aa27.18■■□□□ 1.94
DNMT3A-206ENST00000406659 FANCGO15287 622 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 NMT1P30419 496 aaKnown RBP27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 QARSP47897 775 aaKnown RBP27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 ZNF131P52739 623 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 CDK17Q00537 523 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 VGLL4Q14135 290 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 FRMD5Q7Z6J6 570 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 CCDC170Q8IYT3 715 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 EDEM3Q9BZQ6 932 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 SNCAIPQ9Y6H5 919 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 NR3C2P08235 984 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 PLS1Q14651 629 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 VSIG10LQ86VR7 867 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 NSUN6Q8TEA1 469 aaKnown RBP27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 ACAD9Q9H845 621 aa27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 DBR1Q9UK59 544 aaKnown RBP27.17■■□□□ 1.94
DNMT3A-206ENST00000406659 EPHB6O15197 1021 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 PPP1R12BO60237 982 aaPredicted RBP27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 NR3C1P04150 777 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 JAK3P52333 1124 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 KRT83P78385 493 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 KCNMA1Q12791 1236 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 PADI6Q6TGC4 694 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 NLRX1Q86UT6 975 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 FAM178BQ8IXR5 827 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 ZNF710Q8N1W2 664 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 CCDC155Q8N6L0 562 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 IRX2Q9BZI1 471 aaPredicted RBP27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 NHEJ1Q9H9Q4 299 aaPredicted RBP27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 ARMCX3Q9UH62 379 aaPredicted RBP27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 CSADQ9Y600 493 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 ASTN1O14525 1302 aa27.16■■□□□ 1.94
DNMT3A-206ENST00000406659 SPDYE16A6NNV3 312 aaPredicted RBP27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 HNRNPH3P31942 346 aaKnown RBP27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 KRT76Q01546 638 aa27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 NCBP1Q09161 790 aaKnown RBP27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 ODR4Q5SWX8 454 aa27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 DLK2Q6UY11 383 aa27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 UBE4BO95155 1302 aa27.15■■□□□ 1.94
DNMT3A-206ENST00000406659 ADM5C9JUS6 153 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 ATP9AO75110 1047 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 HIP1RO75146 1068 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 LYPLA2O95372 231 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 SFNP31947 248 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 PPP2R3AQ06190 1150 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 ZNF569Q5MCW4 686 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 ZNF720Q7Z2F6 126 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 CACNA2D4Q7Z3S7 1137 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 GPRASP2Q96D09 838 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 PLAGL2Q9UPG8 496 aa27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 REXO2Q9Y3B8 237 aaKnown RBP27.14■■□□□ 1.94
DNMT3A-206ENST00000406659 WDR64B1ANS9 1081 aa27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 IPO7O95373 1038 aaKnown RBP27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 EPB41P11171 864 aaKnown RBP27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 KCNA1Q09470 495 aa27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 ZC2HC1CQ53FD0 456 aaPredicted RBP27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 RRAGAQ7L523 313 aa27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 CCDC43Q96MW1 224 aaKnown RBP27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 LSM14BQ9BX40 385 aaKnown RBP27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 MAF1Q9H063 256 aa27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 METTL14Q9HCE5 456 aaKnown RBP27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 PCDHB13Q9Y5F0 798 aa27.14■■□□□ 1.93
DNMT3A-206ENST00000406659 SLC16A3O15427 465 aaKnown RBP27.13■■□□□ 1.93
DNMT3A-206ENST00000406659 MAFGO15525 162 aa27.13■■□□□ 1.93
DNMT3A-206ENST00000406659 ARHGAP25P42331 645 aa27.13■■□□□ 1.93
DNMT3A-206ENST00000406659 KCNH2Q12809 1159 aa27.13■■□□□ 1.93
DNMT3A-206ENST00000406659 ANKRD7Q92527 254 aa27.13■■□□□ 1.93
DNMT3A-206ENST00000406659 CYP39A1Q9NYL5 469 aa27.13■■□□□ 1.93
DNMT3A-206ENST00000406659 EIF3CLB5ME19 914 aaKnown RBP27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 CLIC2O15247 247 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 NAA30Q147X3 362 aaPredicted RBP27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 MTERF4Q7Z6M4 381 aaKnown RBP27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 FIZ1Q96SL8 496 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 EIF3CQ99613 913 aaKnown RBP27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 TGFB1I1O43294 461 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms