RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TRIM10Q9UDY6 481 aa6.35□□□□□ -1.39
HDAC9-203ENST00000406072 SRP68Q9UHB9 627 aaKnown RBP6.35□□□□□ -1.39
HDAC9-203ENST00000406072 TBK1Q9UHD2 729 aa6.35□□□□□ -1.39
HDAC9-203ENST00000406072 FAM205AQ6ZU69 1335 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ROBO3Q96MS0 1386 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 THAP12O43422 761 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 AHCYL1O43865 530 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ATP5HO75947 161 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 TMCC1O94876 653 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 TFRCP02786 760 aaKnown RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 UBTFL6P0CB48 400 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ATP2B4P23634 1241 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 EIF4A3P38919 411 aaKnown RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ZBED6P86452 979 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ICA1Q05084 483 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 IKQ13123 557 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 RASGRP2Q7LDG7 609 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 TRIML2Q8N7C3 387 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ZNF653Q96CK0 615 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 LRRC37BQ96QE4 947 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 DBNDD2Q9BQY9 259 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 KRT23Q9C075 422 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ZMYND12Q9H0C1 365 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 GJB4Q9NTQ9 266 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 MINPP1Q9UNW1 487 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 SH3BP1Q9Y3L3 701 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 SLX4Q8IY92 1834 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 PGRMC1O00264 195 aaKnown RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 SRGNP10124 158 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ALDH1B1P30837 517 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 ESRRGP62508 458 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 CYLC2Q14093 348 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-203ENST00000406072 Q4G0T1 1027 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 TCP11X2Q5H9J9 407 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 UBL4BQ8N7F7 174 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 FERMT2Q96AC1 680 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 CLMNQ96JQ2 1002 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 RUNDC3BQ96NL0 473 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 CHP1Q99653 195 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 SPZ1Q9BXG8 430 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 LRRC27Q9C0I9 530 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 PALMDQ9NP74 551 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 C2CD2Q9Y426 696 aa6.34□□□□□ -1.39
HDAC9-203ENST00000406072 NCK2O43639 380 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 CARSP49589 748 aaKnown RBP6.34□□□□□ -1.4
HDAC9-203ENST00000406072 TPD52P55327 224 aaPredicted RBP6.34□□□□□ -1.4
HDAC9-203ENST00000406072 TIMM10P62072 90 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 KIF23Q02241 960 aaPredicted RBP6.34□□□□□ -1.4
HDAC9-203ENST00000406072 CHRNDQ07001 517 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 USP4Q13107 963 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 DCAF17Q5H9S7 520 aaPredicted RBP6.34□□□□□ -1.4
HDAC9-203ENST00000406072 TTC38Q5R3I4 469 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 KDM7AQ6ZMT4 941 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 CAPN12Q6ZSI9 719 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 C3orf67Q6ZVT6 689 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 C7orf43Q8WVR3 580 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 XPO6Q96QU8 1125 aaKnown RBP6.34□□□□□ -1.4
HDAC9-203ENST00000406072 MLXIPQ9HAP2 919 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 PFDN4Q9NQP4 134 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 ANLNQ9NQW6 1124 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 FBXL5Q9UKA1 691 aa6.34□□□□□ -1.4
HDAC9-203ENST00000406072 BZW2Q9Y6E2 419 aaKnown RBP6.34□□□□□ -1.4
HDAC9-203ENST00000406072 DEXIO95424 95 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 PPP1R2P41236 205 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 TGFB2P61812 414 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 RPS8P62241 208 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 RNASELQ05823 741 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 TOB2Q14106 344 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CLUL1Q15846 466 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 MAP3K21Q5TCX8 1036 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 RFX8Q6ZV50 586 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 BZW1Q7L1Q6 419 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 SPATA21Q7Z572 469 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 NANOGNBQ7Z5D8 188 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 IFNLR1Q8IU57 520 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 MASTLQ96GX5 879 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 SIKE1Q9BRV8 207 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 VPS37BQ9H9H4 285 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 A1CFQ9NQ94 594 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 TTC26A0AVF1 554 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 ARHGAP10A1A4S6 786 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 I3L4J1 428 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 ZCCHC18P0CG32 403 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 NQO1P15559 274 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 ATP4AP20648 1035 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 ABCB4P21439 1286 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 TNFAIP3P21580 790 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 KIF11P52732 1056 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CUL4BQ13620 913 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 IFIT1BQ5T764 474 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CNNM4Q6P4Q7 775 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 LDHAL6AQ6ZMR3 332 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 PIK3AP1Q6ZUJ8 805 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF589Q86UQ0 364 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 APLFQ8IW19 511 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms