RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 EPN3Q9H201 632 aa15.46■□□□□ 0.06
ATG3-202ENST00000402314 UBR3Q6ZT12 1888 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 NEBLO76041 1014 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 KRT18P05783 430 aaKnown RBP15.45■□□□□ 0.06
ATG3-202ENST00000402314 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
ATG3-202ENST00000402314 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 TRIM58Q8NG06 486 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 SWAP70Q9UH65 585 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 TRPC5Q9UL62 973 aaPredicted RBP15.45■□□□□ 0.06
ATG3-202ENST00000402314 EIF4E1BA6NMX2 242 aaKnown RBP15.45■□□□□ 0.06
ATG3-202ENST00000402314 CCDC170Q8IYT3 715 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 TDRD3Q9H7E2 651 aaKnown RBP15.45■□□□□ 0.06
ATG3-202ENST00000402314 PLAAQ9Y263 795 aa15.45■□□□□ 0.06
ATG3-202ENST00000402314 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
ATG3-202ENST00000402314 hCG_1984214I3L0E3 225 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 MEIS2O14770 477 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 ONECUT3O60422 494 aaPredicted RBP15.44■□□□□ 0.06
ATG3-202ENST00000402314 ARSHQ5FYA8 562 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 CCDC121Q6ZUS5 278 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 ZNF713Q8N859 430 aaPredicted RBP15.44■□□□□ 0.06
ATG3-202ENST00000402314 SH2D4AQ9H788 454 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.44■□□□□ 0.06
ATG3-202ENST00000402314 TLR2O60603 784 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 ELF1P32519 619 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 MMP14P50281 582 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
ATG3-202ENST00000402314 RRP1BQ14684 758 aaKnown RBP15.44■□□□□ 0.06
ATG3-202ENST00000402314 SCFD1Q8WVM8 642 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 LSM14BQ9BX40 385 aaKnown RBP15.44■□□□□ 0.06
ATG3-202ENST00000402314 TLR10Q9BXR5 811 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 HYOU1Q9Y4L1 999 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 SPATA31A6Q5VVP1 1343 aa15.44■□□□□ 0.06
ATG3-202ENST00000402314 ANO9A1A5B4 782 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 SFI1A8K8P3 1242 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 F5H6K3 240 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 DNM1LO00429 736 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 CYP11B2P19099 503 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 ICA1Q05084 483 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 KLRC3Q07444 240 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 ZCWPW2Q504Y3 356 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 KRT27Q7Z3Y8 459 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 RPAINQ86UA6 219 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 CASKIN2Q8WXE0 1202 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 TSG101Q99816 390 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 COL4A3BPQ9Y5P4 624 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 SMCHD1A6NHR9 2005 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 DCDC2CA8MYV0 355 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 FAM86B1E9PN63 330 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 CHUKO15111 745 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 NOL4O94818 638 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 FAM86B2P0C5J1 330 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 ACTN1P12814 892 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 NPR1P16066 1061 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 UBXN2AP68543 259 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 LRRC63Q05C16 580 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.43■□□□□ 0.06
ATG3-202ENST00000402314 A0A1W2PQJ5 194 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 PHF20L1A8MW92 1017 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 POLD1P28340 1107 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 CHRNA5P30532 468 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 MDH1P40925 334 aaKnown RBP15.43■□□□□ 0.06
ATG3-202ENST00000402314 SKOR1P84550 965 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 ARHGAP4P98171 946 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
ATG3-202ENST00000402314 NEDD9Q14511 834 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 FIGNQ5HY92 759 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 ALS2CLQ60I27 953 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 EMBQ6PCB8 327 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 HHIPL2Q6UWX4 724 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 CATSPER3Q86XQ3 398 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 PIK3R5Q8WYR1 880 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 TBC1D5Q92609 795 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 LRRC4CQ9HCJ2 640 aa15.43■□□□□ 0.06
ATG3-202ENST00000402314 DDX20Q9UHI6 824 aaKnown RBP15.43■□□□□ 0.06
ATG3-202ENST00000402314 FSBPO95073 299 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 ORC2Q13416 577 aaPredicted RBP15.42■□□□□ 0.06
ATG3-202ENST00000402314 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 PURBQ96QR8 312 aaKnown RBP15.42■□□□□ 0.06
ATG3-202ENST00000402314 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
ATG3-202ENST00000402314 GH2P01242 217 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 PPP1R2P41236 205 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 KCNA1Q09470 495 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 NAA25Q14CX7 972 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 COBLL1Q53SF7 1204 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 FAM83BQ5T0W9 1011 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 HGSNATQ68CP4 663 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 PDXDC1Q6P996 788 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 IFT20Q8IY31 132 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 AP1M1Q9BXS5 423 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 TRIM31Q9BZY9 425 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 RGL1Q9NZL6 768 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 GGT7Q9UJ14 662 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 PCDHA2Q9Y5H9 948 aa15.42■□□□□ 0.06
ATG3-202ENST00000402314 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms