RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CUL5Q93034 780 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CALML4Q96GE6 196 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CNOT6LQ96LI5 555 aaKnown RBP17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 PNKPQ96T60 521 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CFHR5Q9BXR6 569 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 GUCA1BQ9UMX6 200 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CCNA1P78396 465 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 GHRHRQ02643 423 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TBC1D8BQ0IIM8 1120 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 GPS2Q13227 327 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MUM1L1Q5H9M0 696 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 FIGNQ5HY92 759 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 ANKRD40Q6AI12 368 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MCF2L2Q86YR7 1114 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 SAMD3Q8N6K7 520 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 SHCBP1Q8NEM2 672 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 HOMER2Q9NSB8 354 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MAP3K20Q9NYL2 800 aaKnown RBP17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 FBXO40Q9UH90 709 aa17.62■□□□□ 0.41
CHRFAM7A-203ENST00000401522 A0A1W2PQJ5 194 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MEIS2O14770 477 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TRIM21P19474 475 aaKnown RBP17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MTIF2P46199 727 aaKnown RBP17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CDK17Q00537 523 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TBCKQ8TEA7 893 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 ERGIC2Q96RQ1 377 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MROH8Q9H579 483 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 ACAD9Q9H845 621 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 STK17AQ9UEE5 414 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
CHRFAM7A-203ENST00000401522 NFIBO00712 420 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 KRT86O43790 486 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 IPO7O95373 1038 aaKnown RBP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 ERCC3P19447 782 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TECP42680 631 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 STK4Q13043 487 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CCDC122Q5T0U0 273 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 KIAA1328Q86T90 577 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 RNF186Q9NXI6 227 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 EIF3CLB5ME19 914 aaKnown RBP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 EIF3JO75822 258 aaKnown RBP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CLK2P49760 499 aaKnown RBP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 FKBP15Q5T1M5 1219 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 SV2BQ7L1I2 683 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 NCAPG2Q86XI2 1143 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 JAKMIP2Q96AA8 810 aa17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 EIF3CQ99613 913 aaKnown RBP17.6■□□□□ 0.41
CHRFAM7A-203ENST00000401522 PVALEFA0A1B0GWK0 134 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CFBP00751 764 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 HSD17B4P51659 736 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 PAPD7Q5XG87 772 aaKnown RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 USP17L6PQ6QN14 398 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MTMR9Q96QG7 549 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 NOC4LQ9BVI4 516 aaKnown RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 PORCNQ9H237 461 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TRIM10Q9UDY6 481 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 L1RE1Q9UN81 338 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 FGFR1OPO95684 399 aaKnown RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 RHOXF2BP0C7M4 288 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CALCRLQ16602 461 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TMEM266Q2M3C6 531 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MIIPQ5JXC2 388 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 MCTP2Q6DN12 878 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CENPPQ6IPU0 288 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 WDR93Q6P2C0 686 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 TXLNBQ8N3L3 684 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 RPGRIP1Q96KN7 1286 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 PCMTD1Q96MG8 357 aaPredicted RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 RHOXF2Q9BQY4 288 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 R3HDMLQ9H3Y0 253 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 NHEJ1Q9H9Q4 299 aaPredicted RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 ABCB6Q9NP58 842 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 CALCOCO1Q9P1Z2 691 aa17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 BIN2Q9UBW5 565 aaPredicted RBP17.59■□□□□ 0.41
CHRFAM7A-203ENST00000401522 ERICH4A6NGS2 130 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 FCER1AP12319 257 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MCM3P25205 808 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 CKAP4Q07065 602 aaKnown RBP17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 UNC13DQ70J99 1090 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 KIAA0895Q8NCT3 520 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TSGA10Q9BZW7 698 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 LRRC27Q9C0I9 530 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 EFCC1Q9HA90 598 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 AGPAT5Q9NUQ2 364 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 LRWD1Q9UFC0 647 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SAR1BQ9Y6B6 198 aa17.58■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TRPA1O75762 1119 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms