RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TRPC7Q9HCX4 862 aa14.81□□□□□ -0.04
VAPA-202ENST00000400000 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
VAPA-202ENST00000400000 CHRNA5P30532 468 aa14.81□□□□□ -0.04
VAPA-202ENST00000400000 FBXL13Q8NEE6 735 aa14.81□□□□□ -0.04
VAPA-202ENST00000400000 AFF2P51816 1311 aa14.81□□□□□ -0.04
VAPA-202ENST00000400000 ZBED1O96006 694 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 ELMOD1Q8N336 334 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 BHMT2Q9H2M3 363 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 KANSL2Q9H9L4 492 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 IFT43Q96FT9 208 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 EDEM3Q9BZQ6 932 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 SMYD3Q9H7B4 428 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 PCSK1NQ9UHG2 260 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 STMN1P16949 149 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 ZNF445P59923 1031 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 GPATCH4Q5T3I0 446 aaKnown RBP14.8□□□□□ -0.04
VAPA-202ENST00000400000 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 SNRNP48Q6IEG0 339 aaKnown RBP14.8□□□□□ -0.04
VAPA-202ENST00000400000 RFX8Q6ZV50 586 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 FAM213AQ9BRX8 229 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 SLC9A5Q14940 896 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 TBC1D9BQ66K14 1250 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 NLRP10Q86W26 655 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 CCDC51Q96ER9 411 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 CFAP69A5D8W1 941 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L15C9J2P7 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L13C9JLJ4 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L11C9JVI0 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L18D6R9N7 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L22D6RA61 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L17D6RBQ6 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L19D6RCP7 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L20D6RJB6 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L24Q0WX57 530 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 USP17L6PQ6QN14 398 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.8□□□□□ -0.046e-6■■□□□ 14.1
VAPA-202ENST00000400000 TTC1Q99614 292 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 POTEMA6NI47 508 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 SLC16A4O15374 487 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 FOSP01100 380 aaPredicted RBP14.8□□□□□ -0.04
VAPA-202ENST00000400000 SH2D3AQ9BRG2 576 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 PNMA2Q9UL42 364 aa14.8□□□□□ -0.04
VAPA-202ENST00000400000 LARGE1O95461 756 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 ERFP50548 548 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 SIK2Q9H0K1 926 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 SRGAP2O75044 1071 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 MAP3K21Q5TCX8 1036 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 POU5F1BQ06416 359 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 DHX9Q08211 1270 aaKnown RBP14.79□□□□□ -0.04
VAPA-202ENST00000400000 DRP2Q13474 957 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 ZMYM1Q5SVZ6 1142 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 FASTKD5Q7L8L6 764 aaKnown RBP14.79□□□□□ -0.04
VAPA-202ENST00000400000 ABTB1Q969K4 478 aaPredicted RBP14.79□□□□□ -0.04
VAPA-202ENST00000400000 TTC17Q96AE7 1141 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 PCDHA13Q9Y5I0 950 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 ATP8B3O60423 1300 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 WDR17Q8IZU2 1322 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 CCDC78A2IDD5 438 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 TRIM49BA6NDI0 452 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 SOX11P35716 441 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 MXI1P50539 228 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 R3HDM1Q15032 1099 aaKnown RBP14.79□□□□□ -0.04
VAPA-202ENST00000400000 FSD1LQ9BXM9 530 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 ADAM33Q9BZ11 813 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 SCHIP1Q9P0W5 487 aaPredicted RBP14.79□□□□□ -0.04
VAPA-202ENST00000400000 TMEM62Q0P6H9 643 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 MTMR1Q13613 665 aa14.79□□□□□ -0.04
VAPA-202ENST00000400000 ZNF658Q5TYW1 1059 aaPredicted RBP14.79□□□□□ -0.04
VAPA-202ENST00000400000 EXOC1LA0A1B0GW35 172 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 BPIFB4P59827 614 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 A0A0G2JLW4 131 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 SERPIND1P05546 499 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 AP1B1Q10567 949 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 GSPT2Q8IYD1 628 aaKnown RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 RAPGEF5Q92565 580 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 GTSE1Q9NYZ3 720 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 KLHL8Q9P2G9 620 aaPredicted RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 KIAA0556O60303 1618 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 TCP1P17987 556 aaKnown RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 GYS2P54840 703 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 GALNT17Q6IS24 598 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 NOVA2Q9UNW9 492 aaKnown RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 IRF1P10914 325 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 ELP3Q9H9T3 547 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 NUP160Q12769 1436 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 HMBSP08397 361 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 LCP1P13796 627 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 COPB2P35606 906 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 IL6STP40189 918 aaPredicted RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 ARHGDIAP52565 204 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 ZNF568Q3ZCX4 644 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 ZNF746Q6NUN9 644 aaPredicted RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 THEM5Q8N1Q8 247 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 MASTLQ96GX5 879 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 RMDN3Q96TC7 470 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms