RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 A0A1W2PQ64 194 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 A0A1W2PQD8 194 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 C17orf102A2RUQ5 167 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 VPS37CA5D8V6 355 aaPredicted RBP8.44□□□□□ -1.06
USP16-204ENST00000399976 ASAP2O43150 1006 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 MYL3P08590 195 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 CLTBP09497 229 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 SMIM10L2AP0DMW4 78 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 SMIM10L2BP0DMW5 78 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 CCDC60Q8IWA6 550 aaPredicted RBP8.44□□□□□ -1.06
USP16-204ENST00000399976 PAWRQ96IZ0 340 aaKnown RBP8.44□□□□□ -1.06
USP16-204ENST00000399976 NACC1Q96RE7 527 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 PDLIM7Q9NR12 457 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 CHMP5Q9NZZ3 219 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 ZDHHC9Q9Y397 364 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 NR2E3Q9Y5X4 410 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 ZBTB42B2RXF5 422 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 EFCAB14O75071 495 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 CXCL10P02778 98 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 MYL1P05976 194 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 MCM7P33993 719 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 KRT85P78386 507 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 GUCY1B3Q02153 619 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 KIAA0753Q2KHM9 967 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 NBPF20Q3BBV1 942 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 TCP11Q8WWU5 503 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 EIF2AK1Q9BQI3 630 aaKnown RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 DHX33Q9H6R0 707 aaKnown RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 PTPRSQ13332 1948 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 WNT7AO00755 349 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 MAFO75444 373 aaPredicted RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 SLITRK3O94933 977 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 ATP4AP20648 1035 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 MCTP1Q6DN14 999 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 RSPH3Q86UC2 560 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 C7orf31Q8N865 590 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 CTAGE1Q96RT6 745 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 LRRC27Q9C0I9 530 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 PDCD11Q14690 1871 aaKnown RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 CEP350Q5VT06 3117 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 CCDC85CA6NKD9 419 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 DGAT1O75907 488 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 C22orf31O95567 290 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 TIMP1P01033 207 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 BEX3Q00994 111 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 PRKCEQ02156 737 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 SF3A1Q15459 793 aaKnown RBP8.43□□□□□ -1.06
USP16-204ENST00000399976 GRIK4Q16099 956 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 LRRC26Q2I0M4 334 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 TMEM63BQ5T3F8 832 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 KRT79Q5XKE5 535 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 PDXDC2PQ6P474 469 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 CXCL17Q6UXB2 119 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 ZNF410Q86VK4 478 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 RETREG2Q8NC44 543 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 APBB2Q92870 758 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 LRWD1Q9UFC0 647 aa8.43□□□□□ -1.06
USP16-204ENST00000399976 EYA4O95677 639 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 MGAT3Q09327 533 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 PPFIA1Q13136 1202 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 ZNF174Q15697 407 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 MARCH8Q5T0T0 291 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 MCPH1Q8NEM0 835 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 LENG1Q96BZ8 264 aaPredicted RBP8.42□□□□□ -1.06
USP16-204ENST00000399976 LXNQ9BS40 222 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 NOC4LQ9BVI4 516 aaKnown RBP8.42□□□□□ -1.06
USP16-204ENST00000399976 GTPBP4Q9BZE4 634 aaKnown RBP8.42□□□□□ -1.06
USP16-204ENST00000399976 GABBR1Q9UBS5 961 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 EVPLQ92817 2033 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 EML1O00423 815 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 SPTLC2O15270 562 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 ZNF862O60290 1169 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 BAIAP3O94812 1187 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 MAPTP10636 758 aaKnown RBP8.42□□□□□ -1.06
USP16-204ENST00000399976 GUCY2CP25092 1073 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 TXLNAP40222 546 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 MTHFD1LQ6UB35 978 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 DIS3LQ8TF46 1054 aaKnown RBP8.42□□□□□ -1.06
USP16-204ENST00000399976 LMBR1Q8WVP7 490 aa8.42□□□□□ -1.06
USP16-204ENST00000399976 SENP6Q9GZR1 1112 aaPredicted RBP8.42□□□□□ -1.06
USP16-204ENST00000399976 MARCH6O60337 910 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 MKRN4PQ13434 485 aaPredicted RBP8.41□□□□□ -1.06
USP16-204ENST00000399976 IL17AQ16552 155 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 IER5Q5VY09 327 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 ADALQ6DHV7 355 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 SWSAP1Q6NVH7 229 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 GLG1Q92896 1179 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 USP28Q96RU2 1077 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 MMTAG2Q9BU76 263 aaKnown RBP8.41□□□□□ -1.06
USP16-204ENST00000399976 TRAIPQ9BWF2 469 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 PRO3102Q9H379 93 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms