RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 ZNF713Q8N859 430 aaPredicted RBP13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 RETREG2Q8NC44 543 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 CDK15Q96Q40 435 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 SENP7Q9BQF6 1050 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 ALG1Q9BT22 464 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 BARHL2Q9NY43 387 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 CYP46A1Q9Y6A2 500 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 STXBP3O00186 592 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 MAFGO15525 162 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 ADH1CP00326 375 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 F2P00734 622 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 FOSP01100 380 aaPredicted RBP13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 ZNF286BP0CG31 522 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 HOXD8P13378 290 aaPredicted RBP13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 SEMA3FQ13275 785 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 BFSP2Q13515 415 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 CDHR1Q96JP9 859 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 TM6SF1Q9BZW5 370 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 WNT8AQ9H1J5 351 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
SMIM11A-201ENST00000399292 HAS3O00219 553 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 TIMP2P16035 220 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 PDIA3P30101 505 aaKnown RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 ADCY7P51828 1080 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 EVCP57679 992 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 TSC1Q92574 1164 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 GPRASP2Q96D09 838 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 SCLYQ96I15 445 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 MTIF3Q9H2K0 278 aaKnown RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 UBIAD1Q9Y5Z9 338 aa13.46□□□□□ -0.25
SMIM11A-201ENST00000399292 H3BRB1 525 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 ATP9AO75110 1047 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 IQCF3P0C7M6 154 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 SCG2P13521 617 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 ITGB5P18084 799 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 RFC2P35250 354 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 MTMR1Q13613 665 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 RASIP1Q5U651 963 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 OTOP2Q7RTS6 562 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 CCDC155Q8N6L0 562 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 CAGE1Q8TC20 777 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 CCDC12Q8WUD4 166 aaPredicted RBP13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 HERVK_113Q902F9 699 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 GPR20Q99678 358 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 TUT1Q9H6E5 874 aaKnown RBP13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 JADE2Q9NQC1 790 aa13.45□□□□□ -0.26
SMIM11A-201ENST00000399292 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 PFKMP08237 780 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 IFNAR1P17181 557 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 CCT2P78371 535 aaKnown RBP13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 NTRK3Q16288 839 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 PKN1Q16512 942 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 DEFB128Q7Z7B8 93 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 AFAP1L1Q8TED9 768 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 PHKBQ93100 1093 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 MXRA8Q9BRK3 442 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 UPF3BQ9BZI7 483 aaKnown RBP13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 C6orf50Q9HD87 102 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 KIAA1217Q5T5P2 1943 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 NID2Q14112 1375 aa13.44□□□□□ -0.26
SMIM11A-201ENST00000399292 LGALS2P05162 132 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 KCNA2P16389 499 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 GNA11P29992 359 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 CLK2P49760 499 aaKnown RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 SP4Q02446 784 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 PTK7Q13308 1070 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 AP3B2Q13367 1082 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 AGERQ15109 404 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 C4orf48Q5BLP8 95 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 MCTP2Q6DN12 878 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 MRPL14Q6P1L8 145 aaKnown RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 BPHLQ86WA6 291 aaPredicted RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 SEPT1Q8WYJ6 367 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms