RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 WBP4O75554 376 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 ATF2P15336 505 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 PDE1BQ01064 536 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 CENPKQ9BS16 269 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 SIK2Q9H0K1 926 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 BICRAQ9NZM4 1560 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 DNAJC8O75937 253 aaPredicted RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 ANKRD20A4Q4UJ75 823 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 ANKRD20A8PQ5CZ79 823 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 ANKRD20A2Q5SQ80 823 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 ANKRD20A1Q5TYW2 823 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 TRIM58Q8NG06 486 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 MAP10Q9P2G4 905 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 HEXIM1O94992 359 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 TTC4O95801 387 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 PHBP35232 272 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 ATN1P54259 1190 aaPredicted RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 NNTQ13423 1086 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 FAM26FQ5R3K3 315 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 P3H4Q92791 437 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 MED4Q9NPJ6 270 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 BABAM1Q9NWV8 329 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 GCNT4Q9P109 453 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 CAPN11Q9UMQ6 739 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 LEMD3Q9Y2U8 911 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 MRPL42Q9Y6G3 142 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 HMGCS2P54868 508 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 PTK2Q05397 1052 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 GJC2Q5T442 439 aaPredicted RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 SWSAP1Q6NVH7 229 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 TRIML2Q8N7C3 387 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 PARD6BQ9BYG5 372 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 THEGQ9P2T0 379 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 NOVA2Q9UNW9 492 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 TOM1L1O75674 476 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 SRGAP2BP0DMP2 458 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 KITP10721 976 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 GABPB2Q8TAK5 448 aaPredicted RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 OSBP2Q969R2 916 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 SAAL1Q96ER3 474 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 ATXN7L3BQ96GX2 97 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 NGRNQ9NPE2 291 aaKnown RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 A0A087WUV0 522 aaPredicted RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 MOCS3O95396 460 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 KRT1P04264 644 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 CDR2Q01850 454 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 KCNA1Q09470 495 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 KIAA2013Q8IYS2 634 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 ELAC2Q9BQ52 826 aaKnown RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 MLXIPLQ9NP71 852 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 HEY1Q9Y5J3 304 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 ENO4A6NNW6 628 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 USP17L10C9JJH3 530 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 MYO1CO00159 1063 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 SERPIND1P05546 499 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 PMLP29590 882 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 C10orf76Q5T2E6 689 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 ELMOD1Q8N336 334 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 SPATA33Q96N06 139 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 AP1M1Q9BXS5 423 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 STRIP2Q9ULQ0 834 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 PCDHA7Q9UN72 937 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 PCDHA4Q9UN74 947 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 TMEM2Q9UHN6 1383 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 CPB1P15086 417 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 LLPHQ9BRT6 129 aaKnown RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 K7ERI5 159 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 PLTPP55058 493 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 MTMR1Q13613 665 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 MTMR2Q13614 643 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 ICE2Q659A1 982 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 FASTKD5Q7L8L6 764 aaKnown RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 ATP6V0A1Q93050 837 aa10.05□□□□□ -0.8
ATL3-201ENST00000398868 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
ATL3-201ENST00000398868 DYTNA2CJ06 578 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 POTEMA6NI47 508 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 LARP4BQ92615 738 aaKnown RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 DPF3Q92784 378 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 RIC8AQ9NPQ8 531 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 ATP7AQ04656 1500 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 GRAPQ13588 217 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 PAN2Q504Q3 1202 aaKnown RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 FBXO38Q6PIJ6 1188 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 FAM186BQ8IYM0 893 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 GRAPLQ8TC17 118 aaPredicted RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 ADAM33Q9BZ11 813 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 SPTLC3Q9NUV7 552 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 SLC16A4O15374 487 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms