RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 PIDD1Q9HB75 910 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 LRRC4Q9HBW1 653 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 ZSWIM5Q9P217 1185 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 NR2F2P24468 414 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 DYNLT1P63172 113 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 PPP2R2CQ9Y2T4 447 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 ANGPTL3Q9Y5C1 460 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 DPYSL4O14531 572 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 DDIT3P35638 169 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 EHHADHQ08426 723 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 ZNF449Q6P9G9 518 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 GBP7Q8N8V2 638 aaPredicted RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 RNF139Q8WU17 664 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 LARP4BQ92615 738 aaKnown RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 RASSF4Q9H2L5 321 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 SRGNP10124 158 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 CATSPER4Q7RTX7 472 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 SIX6OS1Q8N1H7 587 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 TACO1Q9BSH4 297 aaKnown RBP15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 KDM6AO15550 1401 aaPredicted RBP15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 A6NNZ2 444 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 H2AFZP0C0S5 128 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 IL1RL1Q01638 556 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 TUBB8Q3ZCM7 444 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 H2AFVQ71UI9 128 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 OSBPL3Q9H4L5 887 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 UBE2Q2LH0YL09 131 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 CYP21A2P08686 494 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 SLC12A1Q13621 1099 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 TSNAXIP1Q2TAA8 658 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 NCAPGQ9BPX3 1015 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 MTMR6Q9Y217 621 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 MTIF3Q9H2K0 278 aaKnown RBP15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 ABCC12Q96J65 1359 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 GOLGA8CPA6NN73 597 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 POLRMTO00411 1230 aaKnown RBP15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 BAG2O95816 211 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 ADCY1Q08828 1119 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 CTTNQ14247 550 aaKnown RBP15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 HEXIM2Q96MH2 286 aaKnown RBP15.41■□□□□ 0.06
PCDHA11-201ENST00000398640 CSF1RP07333 972 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 FAM71BQ8TC56 605 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 SUDS3Q9H7L9 328 aaPredicted RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 RPF1Q9H9Y2 349 aaKnown RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 ACTN1P12814 892 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 EPHB1P54762 984 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 COG2Q14746 738 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 CEP95Q96GE4 821 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 PHLPP1O60346 1717 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 LAD1O00515 517 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 ZBTB5O15062 677 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 SPATA1Q5VX52 437 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 KRT3P12035 628 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 RFC1P35251 1148 aaPredicted RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 PSMC2P35998 433 aaKnown RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 ENC1O14682 589 aa15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 COPB1P53618 953 aaKnown RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 RNF10Q8N5U6 811 aaKnown RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 ALKBH8Q96BT7 664 aaKnown RBP15.4■□□□□ 0.06
PCDHA11-201ENST00000398640 F5H6K3 240 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 KLRC3Q07444 240 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 WHAMMP3Q1A5X7 153 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 MMEL1Q495T6 779 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 NSUN4Q96CB9 384 aaKnown RBP15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 TMEM47Q9BQJ4 181 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 BAIAP2L1Q9UHR4 511 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 GOLGA8IPA6NC78 632 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 GOLGA8JA6NMD2 632 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 KIF3CO14782 793 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 ZNF18P17022 549 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 GNGT1P63211 74 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 MAP7D3Q8IWC1 876 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 MYO1FO00160 1098 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 CDC25AP30304 524 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 OR6B2Q6IFH4 312 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 MYRIPQ8NFW9 859 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 TUBGCP2Q9BSJ2 902 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 FIS1Q9Y3D6 152 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 ARHGEF37A1IGU5 675 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 MTRQ99707 1265 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 TMEM39BQ9GZU3 492 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 TFRCP02786 760 aaKnown RBP15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 MAPK4P31152 587 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 PDE1BQ01064 536 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 AP3B2Q13367 1082 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 ATP6V1E2Q96A05 226 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms