RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 USP38Q8NB14 1042 aa28.69■■■□□ 2.18
U2AF1-203ENST00000398137 SLC5A5Q92911 643 aa28.69■■■□□ 2.18
U2AF1-203ENST00000398137 FTOQ9C0B1 505 aaKnown RBP eCLIP28.69■■■□□ 2.18
U2AF1-203ENST00000398137 KCNMB3Q9NPA1 279 aa28.69■■■□□ 2.18
U2AF1-203ENST00000398137 PCDHA11Q9Y5I1 949 aa28.69■■■□□ 2.18
U2AF1-203ENST00000398137 VCANP13611 3396 aa28.69■■■□□ 2.18
U2AF1-203ENST00000398137 NOP56O00567 594 aaKnown RBP28.68■■■□□ 2.18
U2AF1-203ENST00000398137 DHX15O43143 795 aaKnown RBP28.68■■■□□ 2.18
U2AF1-203ENST00000398137 ZSCAN22P10073 491 aaPredicted RBP28.68■■■□□ 2.18
U2AF1-203ENST00000398137 ADGRE1Q14246 886 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 RILPL1Q5EBL4 403 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 ZNF618Q5T7W0 954 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 LRCH2Q5VUJ6 765 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 SERINC5Q86VE9 423 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 SLC9A2Q9UBY0 812 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 PCDHB6Q9Y5E3 794 aa28.68■■■□□ 2.18
U2AF1-203ENST00000398137 GAS7O60861 476 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 SMIM10L2AP0DMW4 78 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 SMIM10L2BP0DMW5 78 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 ACTN1P12814 892 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 PDIA4P13667 645 aaKnown RBP28.67■■■□□ 2.18
U2AF1-203ENST00000398137 CALCRLQ16602 461 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 RNPEPQ9H4A4 650 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 TBC1D22BQ9NU19 505 aa28.67■■■□□ 2.18
U2AF1-203ENST00000398137 DLL1O00548 723 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 MARCH6O60337 910 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 ARHGEF15O94989 841 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 FAM173BQ6P4H8 233 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 HAS1Q92839 578 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 RIT2Q99578 217 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 TEKT3Q9BXF9 490 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 TMEM60Q9H2L4 133 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 SLC28A3Q9HAS3 691 aa28.66■■■□□ 2.18
U2AF1-203ENST00000398137 TBX3O15119 743 aa28.65■■■□□ 2.18
U2AF1-203ENST00000398137 TREHO43280 583 aa28.65■■■□□ 2.18
U2AF1-203ENST00000398137 CCNE2O96020 404 aa28.65■■■□□ 2.18
U2AF1-203ENST00000398137 ORC2Q13416 577 aaPredicted RBP28.65■■■□□ 2.18
U2AF1-203ENST00000398137 FAM20AQ96MK3 541 aa28.65■■■□□ 2.18
U2AF1-203ENST00000398137 SLC9A7Q96T83 725 aa28.65■■■□□ 2.18
U2AF1-203ENST00000398137 ZSCAN16Q9H4T2 348 aaPredicted RBP28.65■■■□□ 2.18
U2AF1-203ENST00000398137 TCEAL9Q9UHQ7 104 aa28.65■■■□□ 2.18
U2AF1-203ENST00000398137 C17orf102A2RUQ5 167 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 PSMD10O75832 226 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 BAIAP3O94812 1187 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 F13A1P00488 732 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 ACTR2P61160 394 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 ADAM17P78536 824 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 PHOSPHO2Q8TCD6 241 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 OSBPL7Q9BZF2 842 aa28.64■■■□□ 2.18
U2AF1-203ENST00000398137 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.64■■■□□ 2.18
U2AF1-203ENST00000398137 GSTTP1A0A1W2PQM5 241 aa28.63■■■□□ 2.17
U2AF1-203ENST00000398137 CHMP2AO43633 222 aa28.63■■■□□ 2.17
U2AF1-203ENST00000398137 BAG4O95429 457 aaKnown RBP28.63■■■□□ 2.17
U2AF1-203ENST00000398137 WDR5P61964 334 aaKnown RBP28.63■■■□□ 2.17
U2AF1-203ENST00000398137 UTP14CQ5TAP6 766 aaKnown RBP28.63■■■□□ 2.17
U2AF1-203ENST00000398137 TMCO2Q7Z6W1 182 aaPredicted RBP28.63■■■□□ 2.17
U2AF1-203ENST00000398137 HERC6Q8IVU3 1022 aa28.63■■■□□ 2.17
U2AF1-203ENST00000398137 ATP6V0A1Q93050 837 aa28.63■■■□□ 2.17
U2AF1-203ENST00000398137 UNC45AQ9H3U1 944 aa28.63■■■□□ 2.17
U2AF1-203ENST00000398137 SETD4Q9NVD3 440 aa28.63■■■□□ 2.17
U2AF1-203ENST00000398137 REV3LO60673 3130 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 PARNO95453 639 aaKnown RBP28.62■■■□□ 2.17
U2AF1-203ENST00000398137 BRD1O95696 1058 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 CA3P07451 260 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 OR52Z1P0C646 297 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 TCF7P36402 384 aaPredicted RBP28.62■■■□□ 2.17
U2AF1-203ENST00000398137 DEFB103AP81534 67 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 KRT76Q01546 638 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 PPP2R2DQ66LE6 453 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 CNKSR3Q6P9H4 555 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 SLFN12Q8IYM2 578 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 MTMR9Q96QG7 549 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 VAV3Q9UKW4 847 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 ZDHHC9Q9Y397 364 aa28.62■■■□□ 2.17
U2AF1-203ENST00000398137 DDIT3P35638 169 aa28.61■■■□□ 2.17
U2AF1-203ENST00000398137 MKRN4PQ13434 485 aaPredicted RBP28.61■■■□□ 2.17
U2AF1-203ENST00000398137 ZNF746Q6NUN9 644 aaPredicted RBP28.61■■■□□ 2.17
U2AF1-203ENST00000398137 SEPT1Q8WYJ6 367 aa28.61■■■□□ 2.17
U2AF1-203ENST00000398137 THPOP40225 353 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 TXKP42681 527 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 PTGDRQ13258 359 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 SPRED2Q7Z698 418 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 C4orf32Q8N8J7 132 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 LMBR1Q8WVP7 490 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 MICAL3Q7RTP6 2002 aa28.6■■■□□ 2.17
U2AF1-203ENST00000398137 SIP14410 1827 aa28.59■■■□□ 2.17
U2AF1-203ENST00000398137 KAT6AQ92794 2004 aa28.59■■■□□ 2.17
U2AF1-203ENST00000398137 FOXD4L6Q3SYB3 417 aaPredicted RBP28.59■■■□□ 2.17
U2AF1-203ENST00000398137 FOXD4L3Q6VB84 417 aaPredicted RBP28.59■■■□□ 2.17
U2AF1-203ENST00000398137 GAS2L1Q99501 681 aaPredicted RBP28.59■■■□□ 2.17
U2AF1-203ENST00000398137 COL25A1Q9BXS0 654 aaPredicted RBP28.59■■■□□ 2.17
U2AF1-203ENST00000398137 SAMM50Q9Y512 469 aa28.59■■■□□ 2.17
U2AF1-203ENST00000398137 MYH15Q9Y2K3 1946 aa28.59■■■□□ 2.17
U2AF1-203ENST00000398137 EPOPA6NHQ4 379 aa28.58■■■□□ 2.17
U2AF1-203ENST00000398137 WDR64B1ANS9 1081 aa28.58■■■□□ 2.17
U2AF1-203ENST00000398137 TAP1Q03518 808 aa28.58■■■□□ 2.17
U2AF1-203ENST00000398137 MIS18BP1Q6P0N0 1132 aa28.58■■■□□ 2.17
U2AF1-203ENST00000398137 SMAP1Q8IYB5 467 aaPredicted RBP28.58■■■□□ 2.17
U2AF1-203ENST00000398137 PCYT2Q99447 389 aa28.58■■■□□ 2.17
U2AF1-203ENST00000398137 PRDM6Q9NQX0 595 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms