RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 UBE2SQ16763 222 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 FAM43BQ6ZT52 329 aaPredicted RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 CCDC26Q8TAB7 109 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 CASKIN2Q8WXE0 1202 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 SAAL1Q96ER3 474 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 EDEM3Q9BZQ6 932 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 EME2A4GXA9 379 aaPredicted RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 GPSM2P81274 684 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 ITGB3BPQ13352 177 aaPredicted RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 NAB2Q15742 525 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 KIAA0753Q2KHM9 967 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 TMEM119Q4V9L6 283 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 ZNF804AQ7Z570 1209 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 RPGRQ92834 1020 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 PANK4Q9NVE7 773 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 ADAMTS1Q9UHI8 967 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 A0A087X0T9 212 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 ESYT2A0FGR8 921 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 GMNCA6NCL1 334 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 DNAJC8O75937 253 aaPredicted RBP17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 FAM228BP0C875 321 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 PSMD2Q13200 908 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 PTPROQ16827 1216 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 ZCWPW2Q504Y3 356 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 KLHL7Q8IXQ5 586 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 PROM2Q8N271 834 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 DNAJC19Q96DA6 116 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 EBF2Q9HAK2 575 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 MARCH6O60337 910 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 ATP6V1G2O95670 118 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 SERPINB2P05120 415 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 LDHCP07864 332 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 PPARDQ03181 441 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 RBBP5Q15291 538 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 MREGQ8N565 214 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 MICAL1Q8TDZ2 1067 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 GPCPD1Q9NPB8 672 aa17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 LUC7LQ9NQ29 371 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 PPANQ9NQ55 473 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-201ENST00000397901 NPHP3-ACAD11A0A0J9YXS1 232 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 PDIA5Q14554 519 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 KCTD19Q17RG1 926 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 PIK3R5Q8WYR1 880 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 RIOX1Q9H6W3 641 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 NOD2Q9HC29 1040 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 RNF14Q9UBS8 474 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 RAD51CO43502 376 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 BUB1BO60566 1050 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 GHRP10912 638 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 KLHL30Q0D2K2 578 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 SLMAPQ14BN4 828 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 SLC18A3Q16572 532 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 SPRED3Q2MJR0 410 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 ACCSLQ4AC99 568 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 SLC27A3Q5K4L6 730 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 MEI1Q5TIA1 1274 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 CUL5Q93034 780 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 INPP4AQ96PE3 977 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 LRRC27Q9C0I9 530 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 NUCKS1Q9H1E3 243 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 GOLPH3Q9H4A6 298 aa17.44■□□□□ 0.38
CHMP1A-201ENST00000397901 GRID2IPA4D2P6 1211 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 SNUPNO95149 360 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 CRELD2Q6UXH1 353 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 DNAAF5Q86Y56 855 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 DDX25Q9UHL0 483 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 DDX60LQ5H9U9 1706 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 E9PMD0 336 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 OPLAHO14841 1288 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 ELF3P78545 371 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 MAATS1Q7Z4T9 603 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 NSMCE1Q8WV22 266 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 SYN2Q92777 582 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 SEC16BQ96JE7 1060 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 PCDHGC5Q9Y5F6 944 aa17.43■□□□□ 0.38
CHMP1A-201ENST00000397901 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 EPS15P42566 896 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 ASIC2Q16515 512 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 HAS1Q92839 578 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 ITFG2Q969R8 447 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 KDM4CQ9H3R0 1056 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 ZHX3Q9H4I2 956 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 CDK5RAP2Q96SN8 1893 aa17.42■□□□□ 0.38
CHMP1A-201ENST00000397901 KCNK3O14649 394 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms