RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 BIN1O00499 593 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 IREB2P48200 963 aaKnown RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 RBM5P52756 815 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 GRIN1Q05586 938 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 TRIM65Q6PJ69 517 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 ANKRD13AQ8IZ07 590 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SYCE1Q8N0S2 351 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 KLRG1Q96E93 195 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 IGSF9BQ9UPX0 1349 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 EMSYQ7Z589 1322 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 C21orf2O43822 256 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 EPB41P11171 864 aaKnown RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 DSG3P32926 999 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SPDYCQ5MJ68 293 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 TRIM72Q6ZMU5 477 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SEZ6LQ9BYH1 1024 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 FOXP3Q9BZS1 431 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 TMOD4Q9NZQ9 345 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 TXKP42681 527 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 PLCB2Q00722 1185 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 POTEAQ6S8J7 498 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 FAM178BQ8IXR5 827 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 KIAA0895Q8NCT3 520 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SYTL5Q8TDW5 730 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SLC35C1Q96A29 364 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 RUNDC3BQ96NL0 473 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 MIS12Q9H081 205 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 LOC285556D6RIA3 1793 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 GRID2IPA4D2P6 1211 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 FAM205CA6NFA0 338 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 WTIPA6NIX2 430 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 WEE2P0C1S8 567 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SPATA31C1P0DKV0 1188 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 IDEP14735 1019 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 H2AFXP16104 143 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SLC18A3Q16572 532 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 REXO1L1PQ8IX06 675 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 RHOT2Q8IXI1 618 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 NOC4LQ9BVI4 516 aaKnown RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 CARD9Q9H257 536 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 PPP1R11O60927 126 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 COASYQ13057 564 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 ASTE1Q2TB18 679 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 TAF3Q5VWG9 929 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 EDIL3O43854 480 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 AKR1B10O60218 316 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 TDP2O95551 362 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF76P36508 570 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF720Q7Z2F6 126 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 RIOX2Q8IUF8 465 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 MED4Q9NPJ6 270 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPRD-206ENST00000397617 KIAA1024Q9UPX6 916 aa6.44□□□□□ -1.38
PTPRD-206ENST00000397617 PPP1R13BQ96KQ4 1090 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NFKBIZQ9BYH8 718 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 UBA5Q9GZZ9 404 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 ARHGEF35A5YM69 484 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 EZH2Q15910 746 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 RINT1Q6NUQ1 792 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 EMBQ6PCB8 327 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 CEP128Q6ZU80 1094 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 XXYLT1Q8NBI6 393 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 DNAI2Q9GZS0 605 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 POLR2AP24928 1970 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 KIAA1217Q5T5P2 1943 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 TTC26A0AVF1 554 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 PSMC2P35998 433 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 AFMP43652 599 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 IL17AQ16552 155 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 VSIG1Q86XK7 387 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 POTEDQ86YR6 584 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SPAG5Q96R06 1193 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SAP30BPQ9UHR5 308 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 CCPG1Q9ULG6 757 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 FRMD4BQ9Y2L6 1034 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 RIMBP2O15034 1052 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 MAGEB2O15479 319 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SERPING1P05155 500 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SLC12A3P55017 1021 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 CLDN10P78369 228 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 DOK7Q18PE1 504 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 GPBP1Q86WP2 473 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SCFD1Q8WVM8 642 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 GPCPD1Q9NPB8 672 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SAMSN1Q9NSI8 373 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF236Q9UL36 1845 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 MTA2O94776 668 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 RARRES1P49788 294 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 GIT2Q14161 759 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 FAM182BQ5T319 152 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 DPY19L2Q6NUT2 758 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 EMID1Q96A84 441 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NAPGQ99747 312 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 STK33Q9BYT3 514 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 TRAF5O00463 557 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 VWA5AO00534 786 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms