RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 PLXNC1O60486 1568 aa16.14■□□□□ 0.17
CHL1-202ENST00000397491 PRPF3O43395 683 aaKnown RBP16.14■□□□□ 0.17
CHL1-202ENST00000397491 HSPA9P38646 679 aaKnown RBP16.14■□□□□ 0.17
CHL1-202ENST00000397491 STAT2P52630 851 aa16.14■□□□□ 0.17
CHL1-202ENST00000397491 MKRN3Q13064 507 aaKnown RBP16.14■□□□□ 0.17
CHL1-202ENST00000397491 ARL6IP4Q66PJ3 421 aaKnown RBP16.14■□□□□ 0.17
CHL1-202ENST00000397491 TRPM8Q7Z2W7 1104 aa16.14■□□□□ 0.17
CHL1-202ENST00000397491 CALR3Q96L12 384 aaKnown RBP16.14■□□□□ 0.17
CHL1-202ENST00000397491 PALMDQ9NP74 551 aa16.14■□□□□ 0.17
CHL1-202ENST00000397491 DLGAP2Q9P1A6 1054 aa16.14■□□□□ 0.17
CHL1-202ENST00000397491 KRT26Q7Z3Y9 468 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 CHP1Q99653 195 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
CHL1-202ENST00000397491 MIF4GDA9UHW6 222 aaKnown RBP16.13■□□□□ 0.17
CHL1-202ENST00000397491 NVLO15381 856 aaKnown RBP16.13■□□□□ 0.17
CHL1-202ENST00000397491 LIFRP42702 1097 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 SERPINB4P48594 390 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
CHL1-202ENST00000397491 ZIM3Q96PE6 472 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 SLITRK6Q9H5Y7 841 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 CAPN11Q9UMQ6 739 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 PTGISQ16647 500 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 RNPC3Q96LT9 517 aaKnown RBP16.13■□□□□ 0.17
CHL1-202ENST00000397491 XPO6Q96QU8 1125 aaKnown RBP16.13■□□□□ 0.17
CHL1-202ENST00000397491 TC2NQ8N9U0 490 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 OR2W6PQ8NHA6 318 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 SPC25Q9HBM1 224 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 USP40Q9NVE5 1235 aa16.13■□□□□ 0.17
CHL1-202ENST00000397491 RAD9BQ6WBX8 426 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 DEPTORQ8TB45 409 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 PNKPQ96T60 521 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 PCDHB4Q9Y5E5 795 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 PCP11498 1178 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 KIRREL3Q8IZU9 778 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 GFM2Q969S9 779 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 MS4A14Q96JA4 679 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 TRIM10Q9UDY6 481 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 SYNMO15061 1565 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 MAST1Q9Y2H9 1570 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 CCT8L1PA6NM43 557 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 KDM1AO60341 852 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 ADD2P35612 726 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 PIK3CAP42336 1068 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 GYG1P46976 350 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 PSMC1P62191 440 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 TRPV6Q9H1D0 765 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 MRPL47Q9HD33 250 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 KRT37O76014 449 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 P4HA1P13674 534 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 DARS2Q6PI48 645 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 PI16Q6UXB8 463 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 LRIG3Q6UXM1 1119 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 STAG2Q8N3U4 1231 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 A0A1B0GTH6 734 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 PGM1P36871 562 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
CHL1-202ENST00000397491 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 THRAP3Q9Y2W1 955 aaKnown RBP16.12■□□□□ 0.17
CHL1-202ENST00000397491 ATP10AO60312 1499 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 SUPT3HO75486 399 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 POMGNT1Q8WZA1 660 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 CYP4F11Q9HBI6 524 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 PNMA2Q9UL42 364 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 FGFR4P22455 802 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 SERPINB3P29508 390 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 MED21Q13503 144 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 RABGAP1LQ5R372 815 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 NSMFQ6X4W1 530 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 AGGF1Q8N302 714 aaeCLIP16.11■□□□□ 0.17
CHL1-202ENST00000397491 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 CEP19Q96LK0 163 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 PCIF1Q9H4Z3 704 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 RHBDL2Q9NX52 303 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 EHD2Q9NZN4 543 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 TEKT4Q8WW24 435 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 USP6NLQ92738 828 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 A0A1W2PQC6 194 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 GAP43P17677 238 aa16.11■□□□□ 0.17
CHL1-202ENST00000397491 LIMA1Q9UHB6 759 aaKnown RBP16.11■□□□□ 0.17
CHL1-202ENST00000397491 FAM187AA6NFU0 413 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 H3BQF6 201 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 PRKAB2O43741 272 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 AGTP01019 485 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 CNGA1P29973 690 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 CHRNA3P32297 505 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 YARSP54577 528 aaKnown RBP16.1■□□□□ 0.17
CHL1-202ENST00000397491 TLK1Q9UKI8 766 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 GINS2Q9Y248 185 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 IGF2BP3O00425 579 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHL1-202ENST00000397491 HSPA4LO95757 839 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 LTKP29376 864 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
CHL1-202ENST00000397491 CCDC124Q96CT7 223 aaKnown RBP16.1■□□□□ 0.17
CHL1-202ENST00000397491 HEMGNQ9BXL5 484 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms