RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TRAPPC12Q8WVT3 735 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 BBXQ8WY36 941 aaPredicted RBP23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 SCLYQ96I15 445 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 FAM167AQ96KS9 214 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 PRO3102Q9H379 93 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 TANC1Q9C0D5 1861 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 OATP04181 439 aa23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 CSF2RAP15509 400 aa23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 RBL2Q08999 1139 aa23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 MARCH8Q5T0T0 291 aa23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 ZBTB10Q96DT7 871 aa23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 MTMR6Q9Y217 621 aa23.82■■□□□ 1.4
TSPAN4-206ENST00000397408 TRIOBPQ9H2D6 2365 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 MBLAC1A4D2B0 266 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 STX6O43752 255 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 CKBP12277 381 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 BMP8BP34820 402 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 PTGDRQ13258 359 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 EPHA7Q15375 998 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 RUFY4Q6ZNE9 571 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 C4orf32Q8N8J7 132 aa23.81■■□□□ 1.4
TSPAN4-206ENST00000397408 COL1A2P08123 1366 aa23.8■■□□□ 1.4
TSPAN4-206ENST00000397408 POTEMA6NI47 508 aa23.8■■□□□ 1.4
TSPAN4-206ENST00000397408 SELPP16109 830 aa23.8■■□□□ 1.4
TSPAN4-206ENST00000397408 THPOP40225 353 aa23.8■■□□□ 1.4
TSPAN4-206ENST00000397408 PSMC5P62195 406 aa23.8■■□□□ 1.4
TSPAN4-206ENST00000397408 RESTQ13127 1097 aa23.8■■□□□ 1.4
TSPAN4-206ENST00000397408 PPIGQ13427 754 aaKnown RBP eCLIP23.8■■□□□ 1.43e-9■■■□□ 16.8
TSPAN4-206ENST00000397408 IQCF3P0C7M6 154 aa23.79■■□□□ 1.4
TSPAN4-206ENST00000397408 QARSP47897 775 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-206ENST00000397408 EPHB4P54760 987 aa23.79■■□□□ 1.4
TSPAN4-206ENST00000397408 ZNF484Q5JVG2 852 aa23.79■■□□□ 1.4
TSPAN4-206ENST00000397408 TAF2Q6P1X5 1199 aa23.79■■□□□ 1.4
TSPAN4-206ENST00000397408 LRRC8DQ7L1W4 858 aa23.79■■□□□ 1.4
TSPAN4-206ENST00000397408 ZBTB42B2RXF5 422 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 P4HBP07237 508 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 TECP42680 631 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 CYP4A11Q02928 519 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 TMEM266Q2M3C6 531 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 ZNF618Q5T7W0 954 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 DYDC2Q96IM9 177 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 EIF2AK1Q9BQI3 630 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 LXNQ9BS40 222 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 NRBP2Q9NSY0 501 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 RGL1Q9NZL6 768 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 SEPT9Q9UHD8 586 aaPredicted RBP23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 CEP131Q9UPN4 1083 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 SCN5AQ14524 2016 aa23.78■■□□□ 1.4
TSPAN4-206ENST00000397408 CTSHP09668 335 aa23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 KLRC1P26715 233 aa23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 XKR3Q5GH77 459 aa23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 MTHFD1LQ6UB35 978 aa23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 FAM49AQ9H0Q0 323 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 IL23AQ9NPF7 189 aa23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 WRAP73Q9P2S5 460 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-206ENST00000397408 TMEM150BA6NC51 233 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 LAD1O00515 517 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 DKC1O60832 514 aaKnown RBP eCLIP23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 CAND2O75155 1236 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 STBD1O95210 358 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 ACRP10323 421 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 CTTNQ14247 550 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 BECN1Q14457 450 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 TRAF7Q6Q0C0 670 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 NEK9Q8TD19 979 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 PCDHA2Q9Y5H9 948 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 DDX11L8A8MPP1 907 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 C22orf31O95567 290 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 RFC2P35250 354 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 FXR2P51116 673 aaKnown RBP eCLIP23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 ATP2C1P98194 919 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 DEFB128Q7Z7B8 93 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 RSPH3Q86UC2 560 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 TDHQ8IZJ6 230 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 DNAJB3Q8WWF6 145 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 ZSWIM4Q9H7M6 989 aa23.76■■□□□ 1.39
TSPAN4-206ENST00000397408 RSPH10B2B2RC85 870 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 RSPH10BP0C881 870 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 PRPHP41219 470 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 MTERF2Q49AM1 385 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 C9orf50Q5SZB4 431 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 FAM173BQ6P4H8 233 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 RPAINQ86UA6 219 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 TPH2Q8IWU9 490 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 HSD17B14Q9BPX1 270 aa23.75■■□□□ 1.39
TSPAN4-206ENST00000397408 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.75■■□□□ 1.392e-12■□□□□ 9.2
TSPAN4-206ENST00000397408 SMIM35A0A1B0GVV1 85 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 SHHQ15465 462 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 PLA2G4FQ68DD2 849 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 PSRC1Q6PGN9 363 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 ANO5Q75V66 913 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 C16orf59Q7L2K0 433 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 C4orf19Q8IY42 314 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 RPUSD2Q8IZ73 545 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 VWCEQ96DN2 955 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 SH2D3AQ9BRG2 576 aa23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 NIFKQ9BYG3 293 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 ZSCAN16Q9H4T2 348 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-206ENST00000397408 A0A1W2PPC1 479 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms