RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 KLHL33A6NCF5 533 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 PGRMC1O00264 195 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 DAPK3O43293 454 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 MARCH6O60337 910 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 TDP2O95551 362 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 USP11P51784 963 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 IFFO1Q0D2I5 559 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 IFI16Q16666 785 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 GKAP1Q5VSY0 366 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 EIF1ADQ8N9N8 165 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 C3orf20Q8ND61 904 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 SCFD2Q8WU76 684 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 SPAG5Q96R06 1193 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 PIGSQ96S52 555 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 BMP2KQ9NSY1 1161 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 SH3BP1Q9Y3L3 701 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 NOC2LQ9Y3T9 749 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 PHF20L1A8MW92 1017 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 SLC37A4O43826 429 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 ATP6V1G2O95670 118 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 FLT3P36888 993 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 CCDC50Q8IVM0 306 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 MTMR9Q96QG7 549 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 SPZ1Q9BXG8 430 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 ZCWPW1Q9H0M4 648 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 PANK4Q9NVE7 773 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 ETAA1Q9NY74 926 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 AMACRQ9UHK6 382 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 SHANK3Q9BYB0 1731 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 DLEC1Q9Y238 1755 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 GNA14O95837 355 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
CAPN3-206ENST00000397163 DHX9Q08211 1270 aaKnown RBP10□□□□□ -0.81
CAPN3-206ENST00000397163 AGBL2Q5U5Z8 902 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 BARGINQ6ZT62 677 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 PEX26Q7Z412 305 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 METTL13Q8N6R0 699 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 ACTRT1Q8TDG2 376 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 NLRP3Q96P20 1036 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 BUD13Q9BRD0 619 aaKnown RBP eCLIP10□□□□□ -0.81
CAPN3-206ENST00000397163 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 DPH5Q9H2P9 285 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 ZHX3Q9H4I2 956 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 AIPL1Q9NZN9 384 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 SAP30BPQ9UHR5 308 aaKnown RBP10□□□□□ -0.81
CAPN3-206ENST00000397163 GGT7Q9UJ14 662 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 CASZ1Q86V15 1759 aa10□□□□□ -0.81
CAPN3-206ENST00000397163 DCDC2CA8MYV0 355 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 CES2O00748 559 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 PTK2Q05397 1052 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ZCWPW2Q504Y3 356 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 BZW1Q7L1Q6 419 aaKnown RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 TRIM59Q8IWR1 403 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 SH3RF3Q8TEJ3 882 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 TGFBRAP1Q8WUH2 860 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 HVCN1Q96D96 273 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 TRIM31Q9BZY9 425 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ACTN1P12814 892 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ITGA4P13612 1032 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ORC2Q13416 577 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 TBC1D1Q86TI0 1168 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 CCDC26Q8TAB7 109 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 TATDN2Q93075 761 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 TNNI2P48788 182 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ADAM9Q13443 819 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 FAM98CQ17RN3 349 aaKnown RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 CAPRIN2Q6IMN6 1127 aaKnown RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ALKBH5Q6P6C2 394 aaKnown RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ARMC9Q7Z3E5 817 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 ZNF571Q7Z3V5 609 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-206ENST00000397163 MDM1Q8TC05 714 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 SH3GL3Q99963 347 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 FGFBP2Q9BYJ0 223 aa9.99□□□□□ -0.81
CAPN3-206ENST00000397163 CCDC188H7C350 402 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 TTI1O43156 1089 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 LGR5O75473 907 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 ANP32DO95626 131 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 RXRBP28702 533 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 ELF3P78545 371 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 ADCY2Q08462 1091 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 KCNH2Q12809 1159 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 HERC4Q5GLZ8 1057 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 C10orf76Q5T2E6 689 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 MAPKAPK5Q8IW41 473 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 PRCCQ92733 491 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 SAAL1Q96ER3 474 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 PSMD1Q99460 953 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 CELF4Q9BZC1 486 aaKnown RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 GANQ9H2C0 597 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 G3BP2Q9UN86 482 aaKnown RBP9.98□□□□□ -0.81
CAPN3-206ENST00000397163 TRPC6Q9Y210 931 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
CAPN3-206ENST00000397163 UTP11Q9Y3A2 253 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms