RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MYO9BQ13459 2157 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 WDR81Q562E7 1941 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 SMIM35A0A1B0GVV1 85 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 TLL1O43897 1013 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 PPFIA3O75145 1194 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 CCNE2O96020 404 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 AMHP03971 560 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 MBTPS1Q14703 1052 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 PLCB4Q15147 1175 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 BBXQ8WY36 941 aaPredicted RBP15.77■□□□□ 0.12
SEC13-204ENST00000397099 TEKT3Q9BXF9 490 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 UPF2Q9HAU5 1272 aaKnown RBP15.77■□□□□ 0.12
SEC13-204ENST00000397099 TELO2Q9Y4R8 837 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 SAMM50Q9Y512 469 aa15.77■□□□□ 0.12
SEC13-204ENST00000397099 MAFBQ9Y5Q3 323 aaPredicted RBP15.77■□□□□ 0.12
SEC13-204ENST00000397099 DDX39AO00148 427 aaKnown RBP15.76■□□□□ 0.11
SEC13-204ENST00000397099 MSH4O15457 936 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 GAS7O60861 476 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 TRIM29Q14134 588 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 ME3Q16798 604 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 MARCH8Q5T0T0 291 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 LRCH2Q5VUJ6 765 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 PPP4R3AQ6IN85 833 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 SWSAP1Q6NVH7 229 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 DBF4BQ8NFT6 615 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 SLC5A5Q92911 643 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
SEC13-204ENST00000397099 MBOAT7Q96N66 472 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 RAD9AQ99638 391 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 PRDM6Q9NQX0 595 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 LIMCH1Q9UPQ0 1083 aa15.76■□□□□ 0.11
SEC13-204ENST00000397099 ADAMTS3O15072 1205 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 GJB5O95377 273 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 SEC24BO95487 1268 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 IGBP1P78318 339 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 NPY5RQ15761 445 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 ODR4Q5SWX8 454 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 TMCO2Q7Z6W1 182 aaPredicted RBP15.75■□□□□ 0.11
SEC13-204ENST00000397099 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 CCDC60Q8IWA6 550 aaPredicted RBP15.75■□□□□ 0.11
SEC13-204ENST00000397099 CKAP2LQ8IYA6 745 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 ARNTL2Q8WYA1 636 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 SYMPKQ92797 1274 aaKnown RBP15.75■□□□□ 0.11
SEC13-204ENST00000397099 FAM20AQ96MK3 541 aa15.75■□□□□ 0.11
SEC13-204ENST00000397099 LLPHQ9BRT6 129 aaKnown RBP15.75■□□□□ 0.11
SEC13-204ENST00000397099 IFIH1Q9BYX4 1025 aaKnown RBP15.75■□□□□ 0.11
SEC13-204ENST00000397099 KDM3AQ9Y4C1 1321 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 RFXAPO00287 272 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 TBX3O15119 743 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 MAGEB2O15479 319 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 GTPBP6O43824 516 aaPredicted RBP15.74■□□□□ 0.11
SEC13-204ENST00000397099 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 CTSHP09668 335 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 KRT2P35908 639 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 DEFB103AP81534 67 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 MRPS6P82932 125 aaKnown RBP15.74■□□□□ 0.11
SEC13-204ENST00000397099 MGAT3Q09327 533 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 C8orf34Q49A92 452 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 MTHFD1LQ6UB35 978 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 RUFY4Q6ZNE9 571 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 TSHZ1Q6ZSZ6 1077 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 DNAJB3Q8WWF6 145 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 AIFM3Q96NN9 605 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 FTHL17Q9BXU8 183 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
SEC13-204ENST00000397099 SH2B1Q9NRF2 756 aaPredicted RBP15.74■□□□□ 0.11
SEC13-204ENST00000397099 DISC1Q9NRI5 854 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 NRBP2Q9NSY0 501 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
SEC13-204ENST00000397099 THEGQ9P2T0 379 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 DDX25Q9UHL0 483 aaKnown RBP15.74■□□□□ 0.11
SEC13-204ENST00000397099 KCNJ14Q9UNX9 436 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 INSL6Q9Y581 213 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 PTPRSQ13332 1948 aa15.74■□□□□ 0.11
SEC13-204ENST00000397099 IGSF9BQ9UPX0 1349 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 DKC1O60832 514 aaKnown RBP eCLIP15.73■□□□□ 0.11
SEC13-204ENST00000397099 CHRNA1P02708 482 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 TMOD1P28289 359 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 RBM25P49756 843 aaKnown RBP15.73■□□□□ 0.11
SEC13-204ENST00000397099 TAP1Q03518 808 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 MKRN4PQ13434 485 aaPredicted RBP15.73■□□□□ 0.11
SEC13-204ENST00000397099 SKIV2LQ15477 1246 aaKnown RBP15.73■□□□□ 0.11
SEC13-204ENST00000397099 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 FAM117BQ6P1L5 589 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 NSUN7Q8NE18 718 aaKnown RBP15.73■□□□□ 0.11
SEC13-204ENST00000397099 TRPV2Q9Y5S1 764 aa15.73■□□□□ 0.11
SEC13-204ENST00000397099 EDIL3O43854 480 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 PSMD10O75832 226 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 ARHGEF15O94989 841 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
SEC13-204ENST00000397099 KLRC1P26715 233 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 HMGN5P82970 282 aaKnown RBP15.72■□□□□ 0.11
SEC13-204ENST00000397099 CDC42EP1Q00587 391 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 SAFBQ15424 915 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC13-204ENST00000397099 INF2Q27J81 1249 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 TCTN1Q2MV58 587 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 LETM2Q2VYF4 491 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 FBXO47Q5MNV8 452 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 NECAB1Q8N987 351 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms