RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ADCY7P51828 1080 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 RPS6KA1Q15418 735 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 STK17AQ9UEE5 414 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 PVALEFA0A1B0GWK0 134 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 F8W031 263 aaPredicted RBP26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 FKBP3Q00688 224 aaKnown RBP26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 SCFD2Q8WU76 684 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 ABCB11O95342 1321 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 CEP104O60308 925 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 SLC18A3Q16572 532 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 MDM1Q8TC05 714 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 CUL5Q93034 780 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 ANKRD2Q9GZV1 360 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 TRIM37O94972 964 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 KRT71Q3SY84 523 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 DDX47Q9H0S4 455 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 KIAA1024Q9UPX6 916 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 POTEB3A0JP26 581 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 POTECB2RU33 542 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 SART1O43290 800 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 MTMR3Q13615 1198 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 HERC4Q5GLZ8 1057 aaPredicted RBP26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 POTEBQ6S5H4 581 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 CLEC4GQ6UXB4 293 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 CHMP6Q96FZ7 201 aa26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 RSRC1Q96IZ7 334 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-203ENST00000396832 CCT8L1PA6NM43 557 aa26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 STAT3P40763 770 aa26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 DNAJC19Q96DA6 116 aa26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 NUCKS1Q9H1E3 243 aaKnown RBP26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 SWAP70Q9UH65 585 aa26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 AMIGO3Q86WK7 504 aa26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 SYN2Q92777 582 aaPredicted RBP26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 LRRC4CQ9HCJ2 640 aa26.16■■□□□ 1.78
CSNK1E-203ENST00000396832 SLC9A1P19634 815 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 PTK2Q05397 1052 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 TTBK2Q6IQ55 1244 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 DDX25Q9UHL0 483 aaKnown RBP26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 DAPK3O43293 454 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 BUB1BO60566 1050 aaPredicted RBP26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 ASIC2Q16515 512 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 NAIF1Q69YI7 327 aaPredicted RBP26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 CCDC197Q8NCU1 140 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 PSMD1Q99460 953 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 LZTS2Q9BRK4 669 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 TRIM31Q9BZY9 425 aa26.15■■□□□ 1.78
CSNK1E-203ENST00000396832 KRT18P05783 430 aaKnown RBP26.14■■□□□ 1.78
CSNK1E-203ENST00000396832 FXR2P51116 673 aaKnown RBP eCLIP26.14■■□□□ 1.78
CSNK1E-203ENST00000396832 DCAF17Q5H9S7 520 aaPredicted RBP26.14■■□□□ 1.78
CSNK1E-203ENST00000396832 STAMBPL1Q96FJ0 436 aa26.14■■□□□ 1.78
CSNK1E-203ENST00000396832 RTFDC1Q9BY42 306 aaPredicted RBP26.14■■□□□ 1.78
CSNK1E-203ENST00000396832 CES2O00748 559 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 SKAP2O75563 359 aaPredicted RBP26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 KIF4AO95239 1232 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 CASP5P51878 434 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 SLC8A3P57103 927 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 ZCWPW2Q504Y3 356 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 CHADLQ6NUI6 762 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 ADAT2Q7Z6V5 191 aaKnown RBP26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 TCP11Q8WWU5 503 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 XPO6Q96QU8 1125 aaKnown RBP26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 RAB34Q9BZG1 259 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 NAV1Q8NEY1 1877 aa26.14■■□□□ 1.77
CSNK1E-203ENST00000396832 ERMARDQ5T6L9 678 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 HAS1Q92839 578 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 HOOK2Q96ED9 719 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 PBKQ96KB5 322 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 BCAS3Q9H6U6 928 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 EP400Q96L91 3159 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 CTNND1O60716 968 aaKnown RBP26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 ITGA4P13612 1032 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 ADAM9Q13443 819 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 ARHGAP27Q6ZUM4 889 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 TMC3Q7Z5M5 1100 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 GPBP1Q86WP2 473 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 WDR66Q8TBY9 1149 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 ACTRT1Q8TDG2 376 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 NSMCE1Q8WV22 266 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 SPAG5Q96R06 1193 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 ROBO3Q96MS0 1386 aa26.13■■□□□ 1.77
CSNK1E-203ENST00000396832 BHMG1C9JSJ3 638 aaPredicted RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 DHX9Q08211 1270 aaKnown RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 TCERG1LQ5VWI1 586 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 THOC1Q96FV9 657 aaKnown RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 AMACRQ9UHK6 382 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 MEIS1O00470 390 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 CLTAP09496 248 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 KCNH2Q12809 1159 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 MYO1EQ12965 1108 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 GJB7Q6PEY0 223 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 ZNF571Q7Z3V5 609 aaPredicted RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 MAB21L3Q8N8X9 362 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 CCDC63Q8NA47 563 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 NEDD1Q8NHV4 660 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 CELF4Q9BZC1 486 aaKnown RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 CNOT10Q9H9A5 744 aaKnown RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 GNPATO15228 680 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 PPP1R11O60927 126 aaPredicted RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 USP11P51784 963 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms