RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ARP10275 920 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 ACTN1P12814 892 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 OAS2P29728 719 aaKnown RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 CKAP4Q07065 602 aaKnown RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 C1orf186Q6ZWK4 172 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 LDHDQ86WU2 507 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 MTMR14Q8NCE2 650 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 IKZF4Q9H2S9 585 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 TYW1Q9NV66 732 aaKnown RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 ARMCX3Q9UH62 379 aaPredicted RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 CALUO43852 315 aaPredicted RBP18.21■□□□□ 0.51
TRIM39-205ENST00000396551 ERLIN1O75477 346 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 CASP4P49662 377 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 PRELPP51888 382 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 FER1L6Q2WGJ9 1857 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 ZBED3Q96IU2 234 aaPredicted RBP18.21■□□□□ 0.51
TRIM39-205ENST00000396551 OLFML3Q9NRN5 406 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 ZMYM2Q9UBW7 1377 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 SLC9A1P19634 815 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 RAPGEF1Q13905 1077 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 CEP55Q53EZ4 464 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 FAM83AQ86UY5 434 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 CREG2Q8IUH2 290 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 KCTD17Q8N5Z5 321 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 POLR3GO15318 223 aaPredicted RBP18.21■□□□□ 0.51
TRIM39-205ENST00000396551 NR3C1P04150 777 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 COG1Q8WTW3 980 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 UNC45AQ9H3U1 944 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 ZCCHC17Q9NP64 241 aaKnown RBP18.21■□□□□ 0.51
TRIM39-205ENST00000396551 AIPL1Q9NZN9 384 aa18.21■□□□□ 0.51
TRIM39-205ENST00000396551 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
TRIM39-205ENST00000396551 H3BQF6 201 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 CLIC2O15247 247 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 EPS15P42566 896 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 RPGRIP1Q96KN7 1286 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 GAS7O60861 476 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 AFPP02771 609 aaKnown RBP18.2■□□□□ 0.5
TRIM39-205ENST00000396551 NMT1P30419 496 aaKnown RBP18.2■□□□□ 0.5
TRIM39-205ENST00000396551 B3GNT9Q6UX72 402 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 CAGE1Q8TC20 777 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 ZNRF3Q9ULT6 936 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 MYH11P35749 1972 aa18.2■□□□□ 0.5
TRIM39-205ENST00000396551 GAP43P17677 238 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 INPP5BP32019 993 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 MAP3K10Q02779 954 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 ARID5AQ03989 594 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF771Q7L3S4 317 aaPredicted RBP18.19■□□□□ 0.5
TRIM39-205ENST00000396551 HDXQ7Z353 690 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 AGBL3Q8NEM8 1001 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 AGBL1Q96MI9 1066 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 FIZ1Q96SL8 496 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF536O15090 1300 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 NCK2O43639 380 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 BUB1O43683 1085 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 TUBBP07437 444 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 PTGER2P43116 358 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 NFRKBQ6P4R8 1299 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 A0A087X0T9 212 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 WNT10BO00744 389 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 FAM13AO94988 1023 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 FAM228BP0C875 321 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 PRLRP16471 622 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 PON1P27169 355 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 CXCL9Q07325 125 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 EPHA7Q15375 998 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 ZC2HC1CQ53FD0 456 aaPredicted RBP18.19■□□□□ 0.5
TRIM39-205ENST00000396551 OSBPL9Q96SU4 736 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 PLCB1Q9NQ66 1216 aa18.19■□□□□ 0.5
TRIM39-205ENST00000396551 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 ASIC2Q16515 512 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 SLC18A3Q16572 532 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 KLHDC7AQ5VTJ3 777 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 MYCT1Q8N699 235 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 GBP3Q9H0R5 595 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 EHMT1Q9H9B1 1298 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 COL20A1Q9P218 1284 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-205ENST00000396551 SLC16A3O15427 465 aaKnown RBP18.18■□□□□ 0.5
TRIM39-205ENST00000396551 XRCC5P13010 732 aaKnown RBP18.18■□□□□ 0.5
TRIM39-205ENST00000396551 DCAF17Q5H9S7 520 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF572Q7Z3I7 529 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-205ENST00000396551 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 SLC35C1Q96A29 364 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 BORCS6Q96GS4 357 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 DEFB129Q9H1M3 183 aa18.18■□□□□ 0.5
TRIM39-205ENST00000396551 RGS17Q9UGC6 210 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-205ENST00000396551 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRIM39-205ENST00000396551 HSD17B4P51659 736 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 KLHL30Q0D2K2 578 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
TRIM39-205ENST00000396551 IRF2BP2Q7Z5L9 587 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms