RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ZEB2O60315 1214 aa17.2■□□□□ 0.34
HOXA3-202ENST00000396352 PRKCIP41743 596 aa17.2■□□□□ 0.34
HOXA3-202ENST00000396352 TAF4BQ92750 862 aa17.2■□□□□ 0.34
HOXA3-202ENST00000396352 GLT8D2Q9H1C3 349 aa17.2■□□□□ 0.34
HOXA3-202ENST00000396352 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
HOXA3-202ENST00000396352 BZW2Q9Y6E2 419 aaKnown RBP17.2■□□□□ 0.34
HOXA3-202ENST00000396352 EPHA7Q15375 998 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 MOXD1Q6UVY6 613 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 EIF1ADQ8N9N8 165 aaKnown RBP17.19■□□□□ 0.34
HOXA3-202ENST00000396352 ATP6V1G3Q96LB4 118 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 USP40Q9NVE5 1235 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 MEIS1O00470 390 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 AKAP3O75969 853 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 SERPINB2P05120 415 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 NR1D1P20393 614 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 HOXA10P31260 410 aaPredicted RBP17.19■□□□□ 0.34
HOXA3-202ENST00000396352 LSP1P33241 339 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 JAM2P57087 298 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 GUCY1A3Q02108 690 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 PABPC4Q13310 644 aaKnown RBP eCLIP17.19■□□□□ 0.34
HOXA3-202ENST00000396352 EXOC3L4Q17RC7 722 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 SYT2Q8N9I0 419 aaPredicted RBP17.19■□□□□ 0.34
HOXA3-202ENST00000396352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.19■□□□□ 0.34
HOXA3-202ENST00000396352 LENG9Q96B70 501 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 PBKQ96KB5 322 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 PLAAQ9Y263 795 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
HOXA3-202ENST00000396352 NDUFAB1O14561 156 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 GYS1P13807 737 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 MICALL1Q8N3F8 863 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 ASTN1O14525 1302 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 XRCC5P13010 732 aaKnown RBP17.18■□□□□ 0.34
HOXA3-202ENST00000396352 LIG3P49916 1009 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 ARHGAP4P98171 946 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 ALKBH5Q6P6C2 394 aaKnown RBP17.18■□□□□ 0.34
HOXA3-202ENST00000396352 TPCN2Q8NHX9 752 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 C8orf37Q96NL8 207 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 ATXN2Q99700 1313 aaKnown RBP17.18■□□□□ 0.34
HOXA3-202ENST00000396352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
HOXA3-202ENST00000396352 PDXKO00764 312 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 RPA1P27694 616 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
HOXA3-202ENST00000396352 PTPROQ16827 1216 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
HOXA3-202ENST00000396352 CDC42EP5Q6NZY7 148 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 KAT2BQ92831 832 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 FBXL5Q9UKA1 691 aa17.18■□□□□ 0.34
HOXA3-202ENST00000396352 RIMBP2O15034 1052 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 BMT2Q1RMZ1 405 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 PRR16Q569H4 304 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 SLFN11Q7Z7L1 901 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 METTL13Q8N6R0 699 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 CALR3Q96L12 384 aaKnown RBP17.17■□□□□ 0.34
HOXA3-202ENST00000396352 EPN3Q9H201 632 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 BCAS3Q9H6U6 928 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 LTBP4Q8N2S1 1624 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 HMGB1P1B2RPK0 211 aaPredicted RBP17.17■□□□□ 0.34
HOXA3-202ENST00000396352 H0YGN5 161 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 CEP104O60308 925 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 HSD17B3P37058 310 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 AP3B2Q13367 1082 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 CUL1Q13616 776 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 UAP1Q16222 522 aaPredicted RBP17.17■□□□□ 0.34
HOXA3-202ENST00000396352 Q4G0T1 1027 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 DCAF17Q5H9S7 520 aaPredicted RBP17.17■□□□□ 0.34
HOXA3-202ENST00000396352 SLC35C1Q96A29 364 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 NEUROG2Q9H2A3 272 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 STXBP5LQ9Y2K9 1186 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 NOC2LQ9Y3T9 749 aaKnown RBP17.17■□□□□ 0.34
HOXA3-202ENST00000396352 NFS1Q9Y697 457 aa17.17■□□□□ 0.34
HOXA3-202ENST00000396352 RSPH10B2B2RC85 870 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 CALUO43852 315 aaPredicted RBP17.16■□□□□ 0.34
HOXA3-202ENST00000396352 ERLIN2O94905 339 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 RSPH10BP0C881 870 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 CASP4P49662 377 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 SCNN1DP51172 638 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 NFIAQ12857 509 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 IFI16Q16666 785 aaKnown RBP17.16■□□□□ 0.34
HOXA3-202ENST00000396352 OLIG1Q8TAK6 271 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 AP1M1Q9BXS5 423 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 TMBIM4Q9HC24 238 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 PGRMC1O00264 195 aaKnown RBP17.16■□□□□ 0.34
HOXA3-202ENST00000396352 NR3C1P04150 777 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 ANXA13P27216 316 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
HOXA3-202ENST00000396352 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.349e-8■□□□□ 10
HOXA3-202ENST00000396352 TYW1Q9NV66 732 aaKnown RBP17.16■□□□□ 0.34
HOXA3-202ENST00000396352 FAM86B1E9PN63 330 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 TBX3O15119 743 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 PPP1R37O75864 691 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 FLOT1O75955 427 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 FAM86B2P0C5J1 330 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms