RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TMEM62Q0P6H9 643 aa20.52■□□□□ 0.88
CXCL12-204ENST00000395793 EPC2Q52LR7 807 aa20.52■□□□□ 0.88
CXCL12-204ENST00000395793 RSPH3Q86UC2 560 aa20.52■□□□□ 0.88
CXCL12-204ENST00000395793 RNF26Q9BY78 433 aaPredicted RBP20.52■□□□□ 0.88
CXCL12-204ENST00000395793 C6orf50Q9HD87 102 aa20.52■□□□□ 0.88
CXCL12-204ENST00000395793 POTEB3A0JP26 581 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 LINC00271P0C7V0 271 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 IFNAR1P17181 557 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 PSMA5P28066 241 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 CD52P31358 61 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 POTEBQ6S5H4 581 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 TSHZ1Q6ZSZ6 1077 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 RUFY3Q7L099 469 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 SLC26A6Q9BXS9 759 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 RC3H2Q9HBD1 1191 aaKnown RBP20.51■□□□□ 0.87
CXCL12-204ENST00000395793 ZSWIM6Q9HCJ5 1215 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 VPS54Q9P1Q0 977 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 COG5Q9UP83 839 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 PCDHA2Q9Y5H9 948 aa20.51■□□□□ 0.87
CXCL12-204ENST00000395793 IPO5O00410 1097 aaKnown RBP20.5■□□□□ 0.87
CXCL12-204ENST00000395793 ENPP3O14638 875 aa20.5■□□□□ 0.87
CXCL12-204ENST00000395793 ATP4AP20648 1035 aa20.5■□□□□ 0.87
CXCL12-204ENST00000395793 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
CXCL12-204ENST00000395793 RTN4RL1Q86UN2 441 aaPredicted RBP20.5■□□□□ 0.87
CXCL12-204ENST00000395793 CCDC12Q8WUD4 166 aaPredicted RBP20.5■□□□□ 0.87
CXCL12-204ENST00000395793 LENG9Q96B70 501 aa20.5■□□□□ 0.87
CXCL12-204ENST00000395793 LARP6Q9BRS8 491 aaKnown RBP20.5■□□□□ 0.87
CXCL12-204ENST00000395793 TRPV2Q9Y5S1 764 aa20.5■□□□□ 0.87
CXCL12-204ENST00000395793 BDP1A6H8Y1 2624 aa20.5■□□□□ 0.87
CXCL12-204ENST00000395793 MYO7AQ13402 2215 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 ZBTB42B2RXF5 422 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 ATP8B4Q8TF62 1192 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 HLA-CQ95604 372 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 SAMD11Q96NU1 681 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 ZNF577Q9BSK1 485 aa20.49■□□□□ 0.87
CXCL12-204ENST00000395793 SMIM35A0A1B0GVV1 85 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 BACH1O14867 736 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 EPB41L2O43491 1005 aaKnown RBP20.48■□□□□ 0.87
CXCL12-204ENST00000395793 GNA11P29992 359 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 CIITAP33076 1130 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 SLC26A2P50443 739 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 SETQ01105 290 aaPredicted RBP20.48■□□□□ 0.87
CXCL12-204ENST00000395793 AAK1Q2M2I8 961 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 FAM160B1Q5W0V3 765 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 IL27Q8NEV9 243 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 UPF3BQ9BZI7 483 aaKnown RBP20.48■□□□□ 0.87
CXCL12-204ENST00000395793 ZNF302Q9NR11 478 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 IGSF9BQ9UPX0 1349 aa20.48■□□□□ 0.87
CXCL12-204ENST00000395793 H3BNC9 293 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 HBP1O60381 514 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 KLRC1P26715 233 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
CXCL12-204ENST00000395793 GPM6BQ13491 265 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 PRR16Q569H4 304 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 IER5Q5VY09 327 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 MCTP2Q6DN12 878 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 SWSAP1Q6NVH7 229 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 MIS18BP1Q6P0N0 1132 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 PDXDC2PQ6P474 469 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 CCDC148Q8NFR7 591 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 ZNF689Q96CS4 500 aaPredicted RBP20.47■□□□□ 0.87
CXCL12-204ENST00000395793 MRPL38Q96DV4 380 aaKnown RBP20.47■□□□□ 0.87
CXCL12-204ENST00000395793 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 CELF4Q9BZC1 486 aaKnown RBP20.47■□□□□ 0.87
CXCL12-204ENST00000395793 PADI3Q9ULW8 664 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 SQORQ9Y6N5 450 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 ADGRA3Q8IWK6 1321 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 KDM3AQ9Y4C1 1321 aa20.47■□□□□ 0.87
CXCL12-204ENST00000395793 COL1A2P08123 1366 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 RPLP2P05387 115 aaKnown RBP20.46■□□□□ 0.87
CXCL12-204ENST00000395793 TMEM266Q2M3C6 531 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 ZNF746Q6NUN9 644 aaPredicted RBP20.46■□□□□ 0.87
CXCL12-204ENST00000395793 KIAA0319LQ8IZA0 1049 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 FIBCD1Q8N539 461 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 TNPO1Q92973 898 aaKnown RBP20.46■□□□□ 0.87
CXCL12-204ENST00000395793 TMX1Q9H3N1 280 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 UBE2ZQ9H832 354 aaPredicted RBP20.46■□□□□ 0.87
CXCL12-204ENST00000395793 CDHR5Q9HBB8 845 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 TBC1D22BQ9NU19 505 aa20.46■□□□□ 0.87
CXCL12-204ENST00000395793 MAFBQ9Y5Q3 323 aaPredicted RBP20.46■□□□□ 0.87
CXCL12-204ENST00000395793 KRT76Q01546 638 aa20.45■□□□□ 0.86
CXCL12-204ENST00000395793 BICD2Q8TD16 824 aa20.45■□□□□ 0.86
CXCL12-204ENST00000395793 TMEM40Q8WWA1 233 aa20.45■□□□□ 0.86
CXCL12-204ENST00000395793 TM6SF1Q9BZW5 370 aa20.45■□□□□ 0.86
CXCL12-204ENST00000395793 CYP46A1Q9Y6A2 500 aa20.45■□□□□ 0.86
CXCL12-204ENST00000395793 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.44■□□□□ 0.86
CXCL12-204ENST00000395793 M0QZ92 97 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 DGKIO75912 1065 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 C22orf31O95567 290 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 CTNNB1P35222 781 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 PAK2Q13177 524 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 NPY5RQ15761 445 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 ZNF484Q5JVG2 852 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 GJA10Q969M2 543 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 ZNF274Q96GC6 653 aaPredicted RBP20.44■□□□□ 0.86
CXCL12-204ENST00000395793 AIFM3Q96NN9 605 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 SH3GLB2Q9NR46 395 aa20.44■□□□□ 0.86
CXCL12-204ENST00000395793 FNDC1Q4ZHG4 1894 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms