RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 RPAP3Q9H6T3 665 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-204ENST00000395756 PITPNM2Q9BZ72 1349 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 AKAP3O75969 853 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 VCAM1P19320 739 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 SLC9A1P19634 815 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 SP4Q02446 784 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 TNFAIP1Q13829 316 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 JADE2Q9NQC1 790 aa19.7■□□□□ 0.74
SREBF1-204ENST00000395756 RPS6P62753 249 aaKnown RBP19.69■□□□□ 0.74
SREBF1-204ENST00000395756 ANGEL2Q5VTE6 544 aaKnown RBP19.69■□□□□ 0.74
SREBF1-204ENST00000395756 SLC5A5Q92911 643 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 WRNIP1Q96S55 665 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 TEKT3Q9BXF9 490 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 EHMT1Q9H9B1 1298 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 ARMCX3Q9UH62 379 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-204ENST00000395756 MYO6Q9UM54 1294 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 FRMD3A2A2Y4 597 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 H2AFXP16104 143 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-204ENST00000395756 SRGAP1Q7Z6B7 1085 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 TRIM59Q8IWR1 403 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 BAP1Q92560 729 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 MXRA8Q9BRK3 442 aa19.69■□□□□ 0.74
SREBF1-204ENST00000395756 ZNF185O15231 689 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 ODR4Q5SWX8 454 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 TMCO3Q6UWJ1 677 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 FAM133AQ8N9E0 248 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 CLEC4DQ8WXI8 215 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 ST7Q9NRC1 585 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 SYNPO2Q9UMS6 1093 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 RIPK3Q9Y572 518 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 PCDHA13Q9Y5I0 950 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 TESPA1A2RU30 521 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-204ENST00000395756 ERICH4A6NGS2 130 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 EIF3CLB5ME19 914 aaKnown RBP19.68■□□□□ 0.74
SREBF1-204ENST00000395756 BUB1O43683 1085 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 NOL4O94818 638 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 MIER3Q7Z3K6 550 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 ATG4CQ96DT6 458 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 CEP63Q96MT8 703 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 EIF3CQ99613 913 aaKnown RBP19.68■□□□□ 0.74
SREBF1-204ENST00000395756 DDX41Q9UJV9 622 aaKnown RBP19.68■□□□□ 0.74
SREBF1-204ENST00000395756 ZHX2Q9Y6X8 837 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 ARFGEF1Q9Y6D6 1849 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 A0A1W2PQJ5 194 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 MOCS3O95396 460 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 NR3C1P04150 777 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 MYCNP04198 464 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-204ENST00000395756 CYP2J2P51589 502 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 CCDC170Q8IYT3 715 aa19.68■□□□□ 0.74
SREBF1-204ENST00000395756 HMGCS2P54868 508 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 FIGNQ5HY92 759 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 C1orf186Q6ZWK4 172 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 ARGLU1Q9NWB6 273 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-204ENST00000395756 ARHGEF35A5YM69 484 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 MAGEA1P43355 309 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 PDXDC1Q6P996 788 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 FAM178BQ8IXR5 827 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 NLGN2Q8NFZ4 835 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 PARVGQ9HBI0 331 aa19.67■□□□□ 0.74
SREBF1-204ENST00000395756 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 WDR46O15213 610 aaKnown RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 PEX10O60683 326 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 PNMA6AP0CW24 399 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 XRCC5P13010 732 aaKnown RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 MRPS9P82933 396 aaKnown RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 PPP2R5CQ13362 524 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 GJB7Q6PEY0 223 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 RSRC2Q7L4I2 434 aaKnown RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 NOA1Q8NC60 698 aaKnown RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 SYTL5Q8TDW5 730 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 NACC1Q96RE7 527 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.66■□□□□ 0.743e-6■■■■■ 45.8
SREBF1-204ENST00000395756 CALUO43852 315 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-204ENST00000395756 CAPN2P17655 700 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 CXCR5P32302 372 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 SFMBT2Q5VUG0 894 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 MTFR1LQ9H019 292 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 VPS33BQ9H267 617 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 ADAMTS1Q9UHI8 967 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 CAPN6Q9Y6Q1 641 aa19.66■□□□□ 0.74
SREBF1-204ENST00000395756 CTAGE15A4D2H0 777 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 TLR2O60603 784 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 ATP9AO75110 1047 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 GNA14O95837 355 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CTAGE8P0CG41 777 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 ITGB3BPQ13352 177 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-204ENST00000395756 MTMR1Q13613 665 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CTAGE6Q86UF2 777 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CTAGE4Q8IX94 777 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 RMDN3Q96TC7 470 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 TUFT1Q9NNX1 390 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 OGFRQ9NZT2 677 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 ZNF646O15015 1829 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-204ENST00000395756 ASTN1O14525 1302 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 ZNF541Q9H0D2 1346 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CTNND1O60716 968 aaKnown RBP19.65■□□□□ 0.74
SREBF1-204ENST00000395756 VAV2P52735 878 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 SYCP3Q8IZU3 236 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 CEP112Q8N8E3 955 aa19.65■□□□□ 0.74
SREBF1-204ENST00000395756 TCEAL9Q9UHQ7 104 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms