RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 COL16A1Q07092 1604 aaPredicted RBP15.62■□□□□ 0.09
CLIP2-203ENST00000395060 A6NNZ2 444 aa15.62■□□□□ 0.09
CLIP2-203ENST00000395060 GFPT2O94808 682 aa15.62■□□□□ 0.09
CLIP2-203ENST00000395060 KRT13P13646 458 aa15.62■□□□□ 0.09
CLIP2-203ENST00000395060 TUBB8Q3ZCM7 444 aa15.62■□□□□ 0.09
CLIP2-203ENST00000395060 PPP4R3AQ6IN85 833 aa15.62■□□□□ 0.09
CLIP2-203ENST00000395060 OTUD6AQ7L8S5 288 aa15.62■□□□□ 0.09
CLIP2-203ENST00000395060 SFI1A8K8P3 1242 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 PCP11498 1178 aaKnown RBP15.61■□□□□ 0.09
CLIP2-203ENST00000395060 RASA1P20936 1047 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 PICALMQ13492 652 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 PPP2R5AQ15172 486 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 SLC30A10Q6XR72 485 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 CCDC25Q86WR0 208 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 MAGEF1Q9HAY2 307 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 MCM8Q9UJA3 840 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 PCDHB13Q9Y5F0 798 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 LDHBP07195 334 aaKnown RBP15.61■□□□□ 0.09
CLIP2-203ENST00000395060 IFI35P80217 286 aaPredicted RBP15.61■□□□□ 0.09
CLIP2-203ENST00000395060 TEX2Q8IWB9 1127 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 MREGQ8N565 214 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 SGSM3Q96HU1 749 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 TMOD4Q9NZQ9 345 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 RNF14Q9UBS8 474 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 BCORQ6W2J9 1755 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 EZRP15311 586 aaKnown RBP15.61■□□□□ 0.09
CLIP2-203ENST00000395060 CHN1P15882 459 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 MYO1EQ12965 1108 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 RUFY4Q6ZNE9 571 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 CD302Q8IX05 232 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 RBM46Q8TBY0 533 aaKnown RBP15.61■□□□□ 0.09
CLIP2-203ENST00000395060 RUBCNQ92622 972 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 STAMBPL1Q96FJ0 436 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 HDAC9Q9UKV0 1011 aa15.61■□□□□ 0.09
CLIP2-203ENST00000395060 POTEFA5A3E0 1075 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 MMEP08473 750 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 PSEN1P49768 467 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 DDR1Q08345 913 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 PREPLQ4J6C6 727 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-203ENST00000395060 POTEGQ6S5H5 508 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 POTEEQ6S8J3 1075 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 CLEC4GQ6UXB4 293 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 TMC3Q7Z5M5 1100 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 FBXO33Q7Z6M2 555 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 PSMD1Q99460 953 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 BMP2KQ9NSY1 1161 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-203ENST00000395060 EMILIN3Q9NT22 766 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 NAGPAQ9UK23 515 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 CCNL1Q9UK58 526 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-203ENST00000395060 PVALEFA0A1B0GWK0 134 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 UBAP1LF5GYI3 381 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 UPP2O95045 317 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 USP11P51784 963 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 MAEAQ7L5Y9 396 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 DNAJC19Q96DA6 116 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 AZI2Q9H6S1 392 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 DNAJC17Q9NVM6 304 aaKnown RBP15.6■□□□□ 0.09
CLIP2-203ENST00000395060 DONSONQ9NYP3 566 aa15.6■□□□□ 0.09
CLIP2-203ENST00000395060 DDX25Q9UHL0 483 aaKnown RBP15.6■□□□□ 0.09
CLIP2-203ENST00000395060 UTP11Q9Y3A2 253 aaKnown RBP15.6■□□□□ 0.09
CLIP2-203ENST00000395060 UCHL3P15374 230 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 PPP1R2P41236 205 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 CASP4P49662 377 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 KCNA1Q09470 495 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 PABPC4Q13310 644 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 SF3B3Q15393 1217 aaKnown RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 TTBK2Q6IQ55 1244 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 YTHDF3Q7Z739 585 aaKnown RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 GLYCTKQ8IVS8 523 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 KIF2BQ8N4N8 673 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 SCFD1Q8WVM8 642 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 MTMR9Q96QG7 549 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 PRMT1Q99873 361 aaKnown RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.094e-7■■■□□ 14.6
CLIP2-203ENST00000395060 PCDHA12Q9UN75 941 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 STK38LQ9Y2H1 464 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 TAL1P17542 331 aaPredicted RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 CDK8P49336 464 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 ADCY7P51828 1080 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 CYP4A11Q02928 519 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 RPAINQ86UA6 219 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 DAGLBQ8NCG7 672 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 TPCN2Q8NHX9 752 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 PTPN22Q9Y2R2 807 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L15C9J2P7 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L13C9JLJ4 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L11C9JVI0 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L18D6R9N7 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L22D6RA61 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L17D6RBQ6 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L19D6RCP7 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L20D6RJB6 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 F8VZ95 297 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 EDIL3O43854 480 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 FGFR4P22455 802 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L24Q0WX57 530 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 USP17L6PQ6QN14 398 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 BARGINQ6ZT62 677 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms