RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 NF2P35240 595 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 OSTNP61366 133 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 GMCL1Q96IK5 515 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 NAA15Q9BXJ9 866 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 UNC45AQ9H3U1 944 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 GABBR1Q9UBS5 961 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 GCLMP48507 274 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 EHHADHQ08426 723 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 CETN1Q12798 172 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 WNK4Q96J92 1243 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 MYO1AQ9UBC5 1043 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 IGKV6D-41A0A0C4DH26 115 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 HIP1RO75146 1068 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 DNAJC21Q5F1R6 531 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 METTL13Q8N6R0 699 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 FBXO41Q8TF61 875 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 LACRTQ9GZZ8 138 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 NOP56O00567 594 aaKnown RBP17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 KLHL7Q8IXQ5 586 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 SCFD1Q8WVM8 642 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 TRIM31Q9BZY9 425 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 ADM5C9JUS6 153 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 RPA1P27694 616 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 PPP1R2P41236 205 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 PDE4DIPQ5VU43 2346 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 LRRC63Q05C16 580 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 GBP3Q9H0R5 595 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 ST7Q9NRC1 585 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 RIPK3Q9Y572 518 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 SAR1BQ9Y6B6 198 aa17.43■□□□□ 0.38
SMARCD1-202ENST00000394963 NFKBIEO00221 500 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 RABEP2Q9H5N1 569 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 SREBF1P36956 1147 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 ZNF746Q6NUN9 644 aaPredicted RBP17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 RINT1Q6NUQ1 792 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 GSPT2Q8IYD1 628 aaKnown RBP17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 PPP1R13LQ8WUF5 828 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 POMGNT1Q8WZA1 660 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 MKL1Q969V6 931 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 CCDC51Q96ER9 411 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 RBAK-RBAKDNI3L0D1 243 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 TNNI1P19237 187 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 SLC7A5Q01650 507 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
SMARCD1-202ENST00000394963 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 NID2Q14112 1375 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 NT5C2P49902 561 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 SMTNP53814 917 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 GIT2Q14161 759 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 CCDC94Q9BW85 323 aaPredicted RBP17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 ATP1A1P05023 1023 aaKnown RBP17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 GMCL1P1Q8NEA9 526 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 PSMD1Q99460 953 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 ERLIN1O75477 346 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 AFPP02771 609 aaKnown RBP17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 GPS2Q13227 327 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 CDR2LQ86X02 465 aaPredicted RBP17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
SMARCD1-202ENST00000394963 POLGP54098 1239 aaPredicted RBP17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 GYS2P54840 703 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 GBP6Q6ZN66 633 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 ATP9AO75110 1047 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 NR3C2P08235 984 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 ODF2Q5BJF6 829 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 CEP112Q8N8E3 955 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 PCDHA13Q9Y5I0 950 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 SLITRK3O94933 977 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 PGK2P07205 417 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 SRGAP2CP0DJJ0 459 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 CLCN6P51797 869 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 MAP2K1Q02750 393 aaPredicted RBP17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 PARD6BQ9BYG5 372 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 FHDC1Q9C0D6 1143 aaPredicted RBP17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 HAUS4Q9H6D7 363 aa17.4■□□□□ 0.38
SMARCD1-202ENST00000394963 ITGB5P18084 799 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 CENPPQ6IPU0 288 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 COL20A1Q9P218 1284 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 CDC23Q9UJX2 597 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 CAPN11Q9UMQ6 739 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 C4AP0C0L4 1744 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 CEP104O60308 925 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 TNFAIP3P21580 790 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 USP14P54578 494 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 CNTN2Q02246 1040 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms