RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ZNF318Q5VUA4 2279 aa24.18■■□□□ 1.46
TRAF4-203ENST00000394925 STAG3L1P0CL83 205 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 CALM1P0DP23 149 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 CALM2P0DP24 149 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 CALM3P0DP25 149 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 NHLH1Q02575 133 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 NAALADL2Q58DX5 795 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 HEATR3Q7Z4Q2 680 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 ADGRD2Q7Z7M1 963 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 RNF135Q8IUD6 432 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 KLHL23Q8NBE8 558 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 KCNH7Q9NS40 1196 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 PCDHA2Q9Y5H9 948 aa24.17■■□□□ 1.46
TRAF4-203ENST00000394925 SCG2P13521 617 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 IBSPP21815 317 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-203ENST00000394925 MRE11P49959 708 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 PAK2Q13177 524 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 PLCB4Q15147 1175 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 HERC4Q5GLZ8 1057 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-203ENST00000394925 CYP2W1Q8TAV3 490 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 POF1BQ8WVV4 589 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 TNPO1Q92973 898 aaKnown RBP24.16■■□□□ 1.46
TRAF4-203ENST00000394925 MXRA8Q9BRK3 442 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 CELF4Q9BZC1 486 aaKnown RBP24.16■■□□□ 1.46
TRAF4-203ENST00000394925 KCNH6Q9H252 994 aa24.16■■□□□ 1.46
TRAF4-203ENST00000394925 IGSF9BQ9UPX0 1349 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 TECTAO75443 2155 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 LIFRP42702 1097 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 GATMP50440 423 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 ACTR2P61160 394 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 TMTC3Q6ZXV5 915 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 FANCBQ8NB91 859 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 MSLNLQ96KJ4 702 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 SDF4Q9BRK5 362 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 LRRC2Q9BYS8 371 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 LRFN2Q9ULH4 789 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 SLC12A7Q9Y666 1083 aa24.15■■□□□ 1.46
TRAF4-203ENST00000394925 STAT5BP51692 787 aa24.14■■□□□ 1.45
TRAF4-203ENST00000394925 TMEM266Q2M3C6 531 aa24.14■■□□□ 1.45
TRAF4-203ENST00000394925 PLPPR4Q7Z2D5 763 aa24.14■■□□□ 1.45
TRAF4-203ENST00000394925 RBM23Q86U06 439 aaKnown RBP24.14■■□□□ 1.45
TRAF4-203ENST00000394925 EFHBQ8N7U6 833 aa24.14■■□□□ 1.45
TRAF4-203ENST00000394925 MFSD14AQ96MC6 490 aa24.14■■□□□ 1.45
TRAF4-203ENST00000394925 CLEC1BQ9P126 229 aa24.14■■□□□ 1.45
TRAF4-203ENST00000394925 NFASCO94856 1347 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 PPFIA3O75145 1194 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 EYA4O95677 639 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 ARP10275 920 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 NRIP1P48552 1158 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 KRT76Q01546 638 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 MICU3Q86XE3 530 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 PGBD1Q96JS3 809 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 TMX1Q9H3N1 280 aa24.13■■□□□ 1.45
TRAF4-203ENST00000394925 SMIM35A0A1B0GVV1 85 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 SLC27A2O14975 620 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 NFX1Q12986 1120 aaKnown RBP24.12■■□□□ 1.45
TRAF4-203ENST00000394925 MTHFD1LQ6UB35 978 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 NME8Q8N427 588 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 EDAQ92838 391 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 LSG1Q9H089 658 aaKnown RBP24.12■■□□□ 1.45
TRAF4-203ENST00000394925 GINS2Q9Y248 185 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 PCDHGC5Q9Y5F6 944 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 PLXNA4Q9HCM2 1894 aa24.12■■□□□ 1.45
TRAF4-203ENST00000394925 KDM3AQ9Y4C1 1321 aa24.11■■□□□ 1.45
TRAF4-203ENST00000394925 ITGB3BPQ13352 177 aaPredicted RBP24.11■■□□□ 1.45
TRAF4-203ENST00000394925 SPOUT1Q5T280 376 aaKnown RBP24.11■■□□□ 1.45
TRAF4-203ENST00000394925 WWC2Q6AWC2 1192 aa24.11■■□□□ 1.45
TRAF4-203ENST00000394925 SMRP1Q8NCR6 262 aa24.11■■□□□ 1.45
TRAF4-203ENST00000394925 AGO4Q9HCK5 861 aaKnown RBP24.11■■□□□ 1.45
TRAF4-203ENST00000394925 BARX2Q9UMQ3 279 aaPredicted RBP24.11■■□□□ 1.45
TRAF4-203ENST00000394925 KLRC1P26715 233 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 SARSP49591 514 aaKnown RBP24.1■■□□□ 1.45
TRAF4-203ENST00000394925 NAPAP54920 295 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 COASYQ13057 564 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 CEP55Q53EZ4 464 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 RIC8AQ9NPQ8 531 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 PCDHB7Q9Y5E2 793 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 EVPLQ92817 2033 aa24.1■■□□□ 1.45
TRAF4-203ENST00000394925 MGEA5O60502 916 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 GLP2RO95838 553 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 CREB3L3Q68CJ9 461 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 TYW1BQ6NUM6 668 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 MICAL1Q8TDZ2 1067 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 TLE6Q9H808 572 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 CDHR5Q9HBB8 845 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 ERVK-5Q9HDB9 667 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 NOC2LQ9Y3T9 749 aaKnown RBP24.09■■□□□ 1.45
TRAF4-203ENST00000394925 PCDHB12Q9Y5F1 795 aa24.09■■□□□ 1.45
TRAF4-203ENST00000394925 FNDC1Q4ZHG4 1894 aaPredicted RBP24.09■■□□□ 1.45
TRAF4-203ENST00000394925 DDX39AO00148 427 aaKnown RBP24.08■■□□□ 1.45
TRAF4-203ENST00000394925 BACH1O14867 736 aa24.08■■□□□ 1.45
TRAF4-203ENST00000394925 ATG7O95352 703 aa24.08■■□□□ 1.45
TRAF4-203ENST00000394925 SLC26A2P50443 739 aa24.08■■□□□ 1.45
TRAF4-203ENST00000394925 SYNE3Q6ZMZ3 975 aa24.08■■□□□ 1.45
TRAF4-203ENST00000394925 SGMS1Q86VZ5 419 aa24.08■■□□□ 1.45
TRAF4-203ENST00000394925 ANO3Q9BYT9 981 aa24.08■■□□□ 1.45
TRAF4-203ENST00000394925 USP15Q9Y4E8 981 aaPredicted RBP24.08■■□□□ 1.45
TRAF4-203ENST00000394925 CNTNAP5Q8WYK1 1306 aa24.08■■□□□ 1.44
TRAF4-203ENST00000394925 DENND3A2RUS2 1198 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 TBKBP1A7MCY6 615 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms