RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 FRMPD4Q14CM0 1322 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 PRPF6O94906 941 aaKnown RBP20.48■□□□□ 0.87
SIL1-202ENST00000394817 UBXN2AP68543 259 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 KCNH2Q12809 1159 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 B3GNT9Q6UX72 402 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 C1orf186Q6ZWK4 172 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 TRIM58Q8NG06 486 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 PIGOQ8TEQ8 1089 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 NLRC4Q9NPP4 1024 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 HDAC6Q9UBN7 1215 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 ZNF536O15090 1300 aa20.48■□□□□ 0.87
SIL1-202ENST00000394817 MACROD2A1Z1Q3 448 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 RBAK-RBAKDNI3L0D1 243 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 EIF3DO15371 548 aaKnown RBP eCLIP20.47■□□□□ 0.87
SIL1-202ENST00000394817 CHMP2AO43633 222 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 EPS15P42566 896 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 TNFAIP1Q13829 316 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 SLC30A10Q6XR72 485 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 TPH2Q8IWU9 490 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 ZNF577Q9BSK1 485 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 GANQ9H2C0 597 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 ARMCX3Q9UH62 379 aaPredicted RBP20.47■□□□□ 0.87
SIL1-202ENST00000394817 CCPG1Q9ULG6 757 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 WDR46O15213 610 aaKnown RBP20.47■□□□□ 0.87
SIL1-202ENST00000394817 SLC16A3O15427 465 aaKnown RBP20.47■□□□□ 0.87
SIL1-202ENST00000394817 PJA2O43164 708 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 GCNT3O95395 438 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 TBC1D8O95759 1140 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 INPP5BP32019 993 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 POLR2FP61218 127 aaKnown RBP20.47■□□□□ 0.87
SIL1-202ENST00000394817 SFMBT2Q5VUG0 894 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 TRPM4Q8TD43 1214 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 LPAR1Q92633 364 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 UNC45AQ9H3U1 944 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 DOCK1Q14185 1865 aa20.47■□□□□ 0.87
SIL1-202ENST00000394817 TLR2O60603 784 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 SERPING1P05155 500 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 ARP10275 920 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 LMNB1P20700 586 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 GHRHRQ02643 423 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 GABPB1Q06547 395 aaPredicted RBP20.46■□□□□ 0.87
SIL1-202ENST00000394817 EPHA7Q15375 998 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 SLC9C1Q4G0N8 1177 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 SAMD1Q6SPF0 538 aaPredicted RBP20.46■□□□□ 0.87
SIL1-202ENST00000394817 TXLNBQ8N3L3 684 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 HNRNPLLQ8WVV9 542 aaKnown RBP20.46■□□□□ 0.87
SIL1-202ENST00000394817 CRACR2AQ9BSW2 395 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 TEKT3Q9BXF9 490 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 PRDM10Q9NQV6 1147 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 KCND2Q9NZV8 630 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 SRCAPQ6ZRS2 3230 aa20.46■□□□□ 0.87
SIL1-202ENST00000394817 FAM13AO94988 1023 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 NR3C1P04150 777 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 BCRP11274 1271 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 RPL13P26373 211 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 TDRD12Q587J7 1177 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 PRPF38AQ8NAV1 312 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 AGBL1Q96MI9 1066 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 PNKPQ96T60 521 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 RIT2Q99578 217 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 MXRA8Q9BRK3 442 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 SEL1LQ9UBV2 794 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 CAPN6Q9Y6Q1 641 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 UBE4BO95155 1302 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 IPO5O00410 1097 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 TACC1O75410 805 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 AFPP02771 609 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 TUBBP07437 444 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 PLA2G4AP47712 749 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 ZNF131P52739 623 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 CKAP4Q07065 602 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 NFIL3Q16649 462 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 NBPF12Q5TAG4 269 aaPredicted RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 NOA1Q8NC60 698 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 NEK9Q8TD19 979 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 RPGRIP1Q96KN7 1286 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 NACC1Q96RE7 527 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 KIAA1683Q9H0B3 1180 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 PARVGQ9HBI0 331 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 METTL14Q9HCE5 456 aaKnown RBP20.45■□□□□ 0.86
SIL1-202ENST00000394817 PLCB1Q9NQ66 1216 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 GINM1Q9NU53 330 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 AIPL1Q9NZN9 384 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 JRKLQ9Y4A0 524 aa20.45■□□□□ 0.86
SIL1-202ENST00000394817 AKAP3O75969 853 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 XRCC5P13010 732 aaKnown RBP20.44■□□□□ 0.86
SIL1-202ENST00000394817 MAGEA1P43355 309 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 ANGEL2Q5VTE6 544 aaKnown RBP20.44■□□□□ 0.86
SIL1-202ENST00000394817 NIPA1Q7RTP0 329 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 CLEC4DQ8WXI8 215 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 HOOK2Q96ED9 719 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 BCAS3Q9H6U6 928 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 WRAP73Q9P2S5 460 aaPredicted RBP20.44■□□□□ 0.86
SIL1-202ENST00000394817 ODF2LQ9ULJ1 636 aa20.44■□□□□ 0.86
SIL1-202ENST00000394817 SASH3O75995 380 aa20.43■□□□□ 0.86
SIL1-202ENST00000394817 EPB41P11171 864 aaKnown RBP20.43■□□□□ 0.86
SIL1-202ENST00000394817 GFPT1Q06210 699 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms