RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PPATQ06203 517 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 TERF2Q15554 542 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 TMEM119Q4V9L6 283 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 SV2BQ7L1I2 683 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 ZNF771Q7L3S4 317 aaPredicted RBP7.74□□□□□ -1.17
RTN4-205ENST00000394609 DYMQ7RTS9 669 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 ARMC9Q7Z3E5 817 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 CATSPER3Q86XQ3 398 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 TEX2Q8IWB9 1127 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 ZNF397Q8NF99 534 aaPredicted RBP7.74□□□□□ -1.17
RTN4-205ENST00000394609 RAD54LQ92698 747 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 HPS3Q969F9 1004 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 ZNF830Q96NB3 372 aaPredicted RBP7.74□□□□□ -1.17
RTN4-205ENST00000394609 RMDN3Q96TC7 470 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 TEX13BQ9BXU2 312 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 WDR11Q9BZH6 1224 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 TMEM51Q9NW97 253 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 RMND1Q9NWS8 449 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 NXF1Q9UBU9 619 aaKnown RBP7.74□□□□□ -1.17
RTN4-205ENST00000394609 VAV3Q9UKW4 847 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 NFE2L3Q9Y4A8 694 aa7.74□□□□□ -1.17
RTN4-205ENST00000394609 A0A0G2JLL6 359 aaPredicted RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 A0A0U1RQG5 324 aaPredicted RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 E9PMD0 336 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 TRIM66O15016 1216 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 KLRC4O43908 158 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 GAS7O60861 476 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 TPM4P67936 248 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 MRPS9P82933 396 aaKnown RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 AMPD3Q01432 767 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 ZNF658Q5TYW1 1059 aaPredicted RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 LRCH2Q5VUJ6 765 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 ARHGEF16Q5VV41 709 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 SARM1Q6SZW1 724 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 PRRT2Q7Z6L0 340 aaPredicted RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 CCDC112Q8NEF3 446 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 KIF18AQ8NI77 898 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 PRR7Q8TB68 274 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 ZNF526Q8TF50 670 aaPredicted RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 LARP4BQ92615 738 aaKnown RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 C7orf25Q9BPX7 421 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 MXRA8Q9BRK3 442 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 ZNF577Q9BSK1 485 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 MAGEF1Q9HAY2 307 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 SAMSN1Q9NSI8 373 aaKnown RBP7.73□□□□□ -1.17
RTN4-205ENST00000394609 RGL1Q9NZL6 768 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 IFNKQ9P0W0 207 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 DOCK1Q14185 1865 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 MYH7BA7E2Y1 1941 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 RPTORQ8N122 1335 aa7.73□□□□□ -1.17
RTN4-205ENST00000394609 DDX39AO00148 427 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 IPO5O00410 1097 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 CXCL11O14625 94 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 ATP2A1O14983 1001 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PSMD10O75832 226 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 MYL1P05976 194 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 SPATA31C1P0DKV0 1188 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 IDEP14735 1019 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 ERCC5P28715 1186 aaPredicted RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 PRCPP42785 496 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 OAZ1P54368 228 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PSMC6P62333 389 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 IRX3P78415 501 aaPredicted RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 GHRHRQ02643 423 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 AMHR2Q16671 573 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 LDLRAD1Q5T700 205 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 OTOP1Q7RTM1 612 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 ERMNQ8TAM6 284 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 ENOX1Q8TC92 643 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 SLC5A5Q92911 643 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 SLC10A4Q96EP9 437 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 EIF2AK1Q9BQI3 630 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 PAGR1Q9BTK6 254 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 XPO4Q9C0E2 1151 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 ASCC2Q9H1I8 757 aaPredicted RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 PXMP2Q9NR77 195 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 KCNH7Q9NS40 1196 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 BTBD7Q9P203 1132 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 NRBP1Q9UHY1 535 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PNMA2Q9UL42 364 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PYCARDQ9ULZ3 195 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 CTNND2Q9UQB3 1225 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 KDM3AQ9Y4C1 1321 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 NPHP3-ACAD11A0A0J9YXS1 232 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 TULP2O00295 520 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 RHOBTB3O94955 611 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 SERPINC1P01008 464 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PLA2G4BP0C869 781 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 FCER1AP12319 257 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 CDK11BP21127 795 aaKnown RBP7.72□□□□□ -1.17
RTN4-205ENST00000394609 RPA1P27694 616 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 FANCCQ00597 558 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PDE4DQ08499 809 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 RAD51AP2Q09MP3 1159 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 STK4Q13043 487 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 PABPC4Q13310 644 aaKnown RBP eCLIP7.72□□□□□ -1.172e-7■■■□□ 16.8
RTN4-205ENST00000394609 PPIL2Q13356 520 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 MTMR1Q13613 665 aa7.72□□□□□ -1.17
RTN4-205ENST00000394609 CTTNQ14247 550 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms