RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 KLRC3Q07444 240 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 ARSHQ5FYA8 562 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 CCDC181Q5TID7 509 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 HEATR3Q7Z4Q2 680 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 FAM133AQ8N9E0 248 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 RASSF8Q8NHQ8 419 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 TBCKQ8TEA7 893 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 SCFD1Q8WVM8 642 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 HES6Q96HZ4 224 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 EP400Q96L91 3159 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 CCDC194A0A1B0GVG4 234 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 CAND2O75155 1236 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 PAFAH1B1P43034 410 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 AGBL2Q5U5Z8 902 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 TPCN2Q8NHX9 752 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
PDCD4-202ENST00000393104 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
PDCD4-202ENST00000393104 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 ATP8A2Q9NTI2 1148 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 NPHP3-ACAD11A0A0J9YXS1 232 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 TTI1O43156 1089 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 KIF1CO43896 1103 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 RASA1P20936 1047 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 ATP2B4P23634 1241 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 MAGOHP61326 146 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NEDD9Q14511 834 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 STYK1Q6J9G0 422 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 SLC30A5Q8TAD4 765 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 MAGOHBQ96A72 148 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 GALNT17Q6IS24 598 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 SP8Q8IXZ3 490 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 N4BP2L2Q92802 583 aaPredicted RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 RPTORQ8N122 1335 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 IPO7O95373 1038 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NPR1P16066 1061 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 SLC9A1P19634 815 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 PDE6BP35913 854 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 MMP13P45452 471 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NT5C2P49902 561 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 COASYQ13057 564 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
PDCD4-202ENST00000393104 NOVA2Q9UNW9 492 aaKnown RBP12.49□□□□□ -0.41
PDCD4-202ENST00000393104 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 SLC16A10Q8TF71 515 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 STK32BQ9NY57 414 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 COL4A3BPQ9Y5P4 624 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 KCNK3O14649 394 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 GHRP10912 638 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 CUL1Q13616 776 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 GALNTL6Q49A17 601 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 SFMBT2Q5VUG0 894 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 MAB21L3Q8N8X9 362 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 SH3RF3Q8TEJ3 882 aaPredicted RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 ZNF570Q96NI8 536 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 TSPY2A6NKD2 308 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 BIRC3Q13489 604 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 CAVIN4Q5BKX8 364 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 CCDC70Q6NSX1 233 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 NEK8Q86SG6 692 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 BORCS6Q96GS4 357 aa12.48□□□□□ -0.41
PDCD4-202ENST00000393104 CALR3Q96L12 384 aaKnown RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 ACTR5Q9H9F9 607 aaPredicted RBP12.48□□□□□ -0.41
PDCD4-202ENST00000393104 DDX3XO00571 662 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDCD4-202ENST00000393104 GCFC2P16383 781 aaKnown RBP12.47□□□□□ -0.41
PDCD4-202ENST00000393104 COPB2P35606 906 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 TXKP42681 527 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 BAG6P46379 1132 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
PDCD4-202ENST00000393104 HYIQ5T013 277 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
PDCD4-202ENST00000393104 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 ATP6V0A4Q9HBG4 840 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 PANK4Q9NVE7 773 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 GRHL1Q9NZI5 618 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
PDCD4-202ENST00000393104 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
PDCD4-202ENST00000393104 GCOM1H8Y6P7 765 aaPredicted RBP12.47□□□□□ -0.41
PDCD4-202ENST00000393104 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms