RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PPARGP37231 505 aaPredicted RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 CLK1P49759 484 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 ALDH6A1Q02252 535 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 MAP3K10Q02779 954 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 SCRN1Q12765 414 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 PMS2P11Q13670 270 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 RASA2Q15283 850 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 KCT2Q8NC54 265 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 CHST14Q8NCH0 376 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MXD3Q9BW11 206 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 BHMT2Q9H2M3 363 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 LGR6Q9HBX8 967 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MBIPQ9NS73 344 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 EIF2B4Q9UI10 523 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 SMC3Q9UQE7 1217 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 SOWAHBA6NEL2 793 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 SOAT2O75908 522 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 UBXN7O94888 489 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 STAT1P42224 750 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 TYRO3Q06418 890 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 LRRC32Q14392 662 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 ARL13BQ3SXY8 428 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 HSP90AA5PQ58FG0 334 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MAP3K21Q5TCX8 1036 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 ERC1Q8IUD2 1116 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 SMC1BQ8NDV3 1235 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 CEP70Q8NHQ1 597 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 FBXO41Q8TF61 875 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 TBC1D5Q92609 795 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 OSBP2Q969R2 916 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 AIFM3Q96NN9 605 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 DESI2Q9BSY9 194 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 TMEM5Q9Y2B1 443 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 ITIH6Q6UXX5 1313 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 PODXLO00592 558 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MEFVO15553 781 aaPredicted RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 HTATSF1O43719 755 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 NDUFS2O75306 463 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 LPLP06858 475 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MUTP22033 750 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 HADHAP40939 763 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 PAPOLAP51003 745 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 EMP3P54852 163 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MPP1Q00013 466 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 CREMQ03060 361 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 LAPTM5Q13571 262 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 WTAPQ15007 396 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 P3H1Q32P28 736 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 FAM35AQ86V20 835 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 CCAR2Q8N163 923 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 BAHD1Q8TBE0 780 aaPredicted RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 STK35Q8TDR2 534 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 KISS1RQ969F8 398 aaPredicted RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 CCDC74BQ96LY2 380 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 SPAG5Q96R06 1193 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 CAMKK2Q96RR4 588 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MENTQ9BUN1 341 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 C14orf93Q9H972 538 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 AKAP7Q9P0M2 348 aaPredicted RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 SCDO00767 359 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 DKC1O60832 514 aaKnown RBP eCLIP3.98□□□□□ -1.77
XRN1-202ENST00000392981 USP1O94782 785 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 NEFHP12036 1026 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 ATP6V1B1P15313 513 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 LSP1P33241 339 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 IRF9Q00978 393 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 CHAF1BQ13112 559 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 PPM1JQ5JR12 505 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 TIGD7Q6NT04 549 aaPredicted RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 SLC30A9Q6PML9 568 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 NLRP8Q86W28 1048 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 OR13H1Q8NG92 308 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 WDR48Q8TAF3 677 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 TTC14Q96N46 770 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 NOX5Q96PH1 765 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 LRRC3Q9BY71 257 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 OBP2BQ9NPH6 170 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MSRAQ9UJ68 235 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 HOOK1Q9UJC3 728 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 AGTPBP1Q9UPW5 1226 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 PCDHGA2Q9Y5H1 932 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 SYCE3A1L190 88 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 H0Y3Z8 333 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ZBED1O96006 694 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 SLC4A1P02730 911 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 POU2F2P09086 479 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ALOX15P16050 662 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 ATP2A2P16615 1042 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 LSSP48449 732 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 COG2Q14746 738 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 FAM26FQ5R3K3 315 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 KLHL24Q6TFL4 600 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 CATSPER4Q7RTX7 472 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 KRT77Q7Z794 578 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ITPKCQ96DU7 683 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ACAT2Q9BWD1 397 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 MRPL9Q9BYD2 267 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 RWDD1Q9H446 243 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 CCM2LQ9NUG4 571 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 ANGPTL3Q9Y5C1 460 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms