RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CXCL17Q6UXB2 119 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 HERVK_113Q902F9 699 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TTYH1Q9H313 450 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ARHGAP6O43182 974 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 DNAJB2P25686 324 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 GNG11P61952 73 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PLCB4Q15147 1175 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 FBXO16Q8IX29 292 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TIFAQ96CG3 184 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 DSCC1Q9BVC3 393 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 WDR11Q9BZH6 1224 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PPP2R2CQ9Y2T4 447 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 LRRC37A2A6NM11 1700 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 EDNRBP24530 442 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 IRAK1P51617 712 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 BEX3Q00994 111 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PDE4DQ08499 809 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ST3GAL1Q11201 340 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TTBK2Q6IQ55 1244 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TLDC1Q6P9B6 456 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 B4GALNT4Q76KP1 1039 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MCF2L2Q86YR7 1114 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CLEC4DQ8WXI8 215 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 FAM161BQ96MY7 647 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 WDR24Q96S15 920 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CNNM2Q9H8M5 875 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 IFNKQ9P0W0 207 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MSRAQ9UJ68 235 aa12.63□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ABCB11O95342 1321 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 A6NNZ2 444 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SNUPNO95149 360 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 FGBP02675 491 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CSF2RAP15509 400 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RFC2P35250 354 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SLC16A2P36021 539 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SMTNP53814 917 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TUBB8Q3ZCM7 444 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 DHX58Q96C10 678 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PNKPQ96T60 521 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MTG1Q9BT17 334 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 KRT23Q9C075 422 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RPS6KL1Q9Y6S9 549 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 NFIBO00712 420 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ARHGAP25P42331 645 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PDCD2Q16342 344 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 IMMTQ16891 758 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SLC5A9Q2M3M2 681 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MAB21L3Q8N8X9 362 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ZNF576Q9H609 170 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 KAT14Q9H8E8 782 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PRPHP41219 470 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SNAP25P60880 206 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 HAND2P61296 217 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TTLL4Q14679 1199 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 NFRKBQ6P4R8 1299 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MYLIPQ8WY64 445 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MAP3K20Q9NYL2 800 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MCM3APO60318 1980 aa12.61□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
TRAF3IP2-208ENST00000392556 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CALML3P27482 149 aa12.6□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CLNS1AP54105 237 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms