RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 AAK1Q2M2I8 961 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 POTEBQ6S5H4 581 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 ABHD15Q6UXT9 468 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 TSHZ1Q6ZSZ6 1077 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 TMEM192Q8IY95 271 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 REXO1Q8N1G1 1221 aaKnown RBP18.87■□□□□ 0.61
PTPRK-208ENST00000392449 SLC26A6Q9BXS9 759 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 AGXT2Q9BYV1 514 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 GLT8D2Q9H1C3 349 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 LMCD1Q9NZU5 365 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 RALGAPA2Q2PPJ7 1873 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 IGKV6D-21A0A0A0MT36 114 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 ESYT2A0FGR8 921 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 IPO5O00410 1097 aaKnown RBP18.86■□□□□ 0.61
PTPRK-208ENST00000392449 NIPA1Q7RTP0 329 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 TRMT1LQ7Z2T5 733 aaKnown RBP18.86■□□□□ 0.61
PTPRK-208ENST00000392449 TEX2Q8IWB9 1127 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 C6orf50Q9HD87 102 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 VPS54Q9P1Q0 977 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
PTPRK-208ENST00000392449 TTC3P53804 2025 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 REC8O95072 547 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 CYP3A4P08684 503 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 LINC00271P0C7V0 271 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 ATP4AP20648 1035 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 PDIA3P30101 505 aaKnown RBP18.85■□□□□ 0.61
PTPRK-208ENST00000392449 GPM6BQ13491 265 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 TOB2Q14106 344 aaPredicted RBP18.85■□□□□ 0.61
PTPRK-208ENST00000392449 TMEM266Q2M3C6 531 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 MTHFD1LQ6UB35 978 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 RTN4RL1Q86UN2 441 aaPredicted RBP18.85■□□□□ 0.61
PTPRK-208ENST00000392449 IL17RAQ96F46 866 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 RC3H2Q9HBD1 1191 aaKnown RBP18.85■□□□□ 0.61
PTPRK-208ENST00000392449 TRPV2Q9Y5S1 764 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 EVPLQ92817 2033 aa18.85■□□□□ 0.61
PTPRK-208ENST00000392449 CSPG5O95196 566 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 KLRC1P26715 233 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 PRR16Q569H4 304 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 IER5Q5VY09 327 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 SWSAP1Q6NVH7 229 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 FBXL16Q8N461 479 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 MRPL38Q96DV4 380 aaKnown RBP18.84■□□□□ 0.61
PTPRK-208ENST00000392449 PPP1R16BQ96T49 567 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 UBE2ZQ9H832 354 aaPredicted RBP18.84■□□□□ 0.61
PTPRK-208ENST00000392449 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 GINS2Q9Y248 185 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 MYO7AQ13402 2215 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 ADGRA3Q8IWK6 1321 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 KIAA1671Q9BY89 1806 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 ZBTB42B2RXF5 422 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 H3BNC9 293 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 EDIL3O43854 480 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 IBSPP21815 317 aaPredicted RBP18.84■□□□□ 0.61
PTPRK-208ENST00000392449 PSMA5P28066 241 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 CTNNB1P35222 781 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 AKAP17AQ02040 695 aaKnown RBP18.84■□□□□ 0.61
PTPRK-208ENST00000392449 PDXDC2PQ6P474 469 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 FIBCD1Q8N539 461 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 ATP8B4Q8TF62 1192 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 CELF4Q9BZC1 486 aaKnown RBP18.84■□□□□ 0.61
PTPRK-208ENST00000392449 UPF3BQ9BZI7 483 aaKnown RBP18.84■□□□□ 0.61
PTPRK-208ENST00000392449 CDHR5Q9HBB8 845 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 PADI3Q9ULW8 664 aa18.84■□□□□ 0.61
PTPRK-208ENST00000392449 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
PTPRK-208ENST00000392449 MYH9P35579 1960 aaKnown RBP18.83■□□□□ 0.6
PTPRK-208ENST00000392449 M0QZ92 97 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 IFNAR1P17181 557 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 KCNA5P22460 613 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 FAM160B1Q5W0V3 765 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 RUFY3Q7L099 469 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 CCDC12Q8WUD4 166 aaPredicted RBP18.83■□□□□ 0.6
PTPRK-208ENST00000392449 GJA10Q969M2 543 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 LENG9Q96B70 501 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 RNF26Q9BY78 433 aaPredicted RBP18.83■□□□□ 0.6
PTPRK-208ENST00000392449 TMX1Q9H3N1 280 aa18.83■□□□□ 0.6
PTPRK-208ENST00000392449 WDR81Q562E7 1941 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 SMIM35A0A1B0GVV1 85 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 HBP1O60381 514 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 DTNBO60941 627 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 GNA11P29992 359 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 GATMP50440 423 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 SLC26A2P50443 739 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 EVCP57679 992 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 KRT76Q01546 638 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 PAK2Q13177 524 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 MIS18BP1Q6P0N0 1132 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 CKAP2LQ8IYA6 745 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 TMEM40Q8WWA1 233 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
PTPRK-208ENST00000392449 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.81■□□□□ 0.6
PTPRK-208ENST00000392449 GRM6O15303 877 aa18.81■□□□□ 0.6
PTPRK-208ENST00000392449 DGKIO75912 1065 aa18.81■□□□□ 0.6
PTPRK-208ENST00000392449 SETQ01105 290 aaPredicted RBP18.81■□□□□ 0.6
PTPRK-208ENST00000392449 STK3Q13188 491 aa18.81■□□□□ 0.6
PTPRK-208ENST00000392449 BTG3Q14201 252 aaPredicted RBP18.81■□□□□ 0.6
PTPRK-208ENST00000392449 PTPROQ16827 1216 aa18.81■□□□□ 0.6
PTPRK-208ENST00000392449 PAN2Q504Q3 1202 aaKnown RBP18.81■□□□□ 0.6
PTPRK-208ENST00000392449 TCEAL5Q5H9L2 206 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms