RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 WDR5P61964 334 aaKnown RBP12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 FAM160B1Q5W0V3 765 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 PDXDC2PQ6P474 469 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 ZBTB10Q96DT7 871 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 ZNF302Q9NR11 478 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 COL1A2P08123 1366 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 BRWD1Q9NSI6 2320 aa12.89□□□□□ -0.35
IGHV4-28-201ENST00000390612 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 CCDC194A0A1B0GVG4 234 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 BACH1O14867 736 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 SLC37A4O43826 429 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 ZNF862O60290 1169 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 EFCAB14O75071 495 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 MMP1P03956 469 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 RPLP2P05387 115 aaKnown RBP12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 PSAPP07602 524 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 GCFC2P16383 781 aaKnown RBP12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 RABGGTBP53611 331 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 NR5A1Q13285 461 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 IKBKEQ14164 716 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 RABEP1Q15276 862 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 ZNF484Q5JVG2 852 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 LRCH2Q5VUJ6 765 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 HERC6Q8IVU3 1022 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 DNAJB3Q8WWF6 145 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 GJA10Q969M2 543 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 FAM161BQ96MY7 647 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 UNC45AQ9H3U1 944 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
IGHV4-28-201ENST00000390612 NCOR1O75376 2440 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 SMIM35A0A1B0GVV1 85 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 FAM205CA6NFA0 338 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 GAS7O60861 476 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 STBD1O95210 358 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 CTSHP09668 335 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 MYOGP15173 224 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 KLRC1P26715 233 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 SFNP31947 248 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 KRT2P35908 639 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 IGBP1P78318 339 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 DEFB103AP81534 67 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 LETM2Q2VYF4 491 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 KRT40Q6A162 431 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 NME8Q8N427 588 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 HAS1Q92839 578 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 GABBR1Q9UBS5 961 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
IGHV4-28-201ENST00000390612 BTBD18B2RXH4 712 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 TBX3O15119 743 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 GJB5O95377 273 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 JAK3P52333 1124 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 PPP2R5CQ13362 524 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 LPIN1Q14693 890 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 UGCGQ16739 394 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 FBXO47Q5MNV8 452 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 KIAA0319LQ8IZA0 1049 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 LINC01465Q8N7H1 131 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 SEPT8Q92599 483 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 TBC1D32Q96NH3 1257 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 CEP89Q96ST8 783 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 CDY2AQ9Y6F7 541 aa12.86□□□□□ -0.35
IGHV4-28-201ENST00000390612 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 EML1O00423 815 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 C22orf31O95567 290 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 KCNJ6P48051 423 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 TARBP2Q15633 366 aaKnown RBP12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 APBB2Q92870 758 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms