RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 EXOSC10Q01780 885 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 LMAN2Q12907 356 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 BFSP2Q13515 415 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 NCOA4Q13772 614 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MCM6Q14566 821 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SMAD2Q15796 467 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM214AQ32MH5 1076 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF618Q5T7W0 954 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MAP1SQ66K74 1059 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF324BQ6AW86 544 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 WWC2Q6AWC2 1192 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 FCRLBQ6BAA4 426 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC2A7Q6PXP3 512 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 Q6ZVH6 145 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 HTR3DQ70Z44 454 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 YTHDF3Q7Z739 585 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 DAAM2Q86T65 1068 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 C12orf40Q86WS4 652 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 DCP2Q8IU60 420 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 RELL1Q8IUW5 271 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ARHGEF19Q8IW93 802 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GALNT12Q8IXK2 581 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MRPL41Q8IXM3 137 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PARP9Q8IXQ6 854 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GPR135Q8IZ08 494 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SIX5Q8N196 739 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 FNBP4Q8N3X1 1017 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 LARGE2Q8N3Y3 721 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC44A3Q8N4M1 653 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 LZTR1Q8N653 840 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 NANOGP1Q8N7R0 232 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 NRACQ8N912 160 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 WDSUB1Q8N9V3 476 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 TTC16Q8NEE8 873 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MDGA1Q8NFP4 955 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CPT1CQ8TCG5 803 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GPR152Q8TDT2 470 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PIGOQ8TEQ8 1089 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CYB5D2Q8WUJ1 264 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CFHR4Q92496 578 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ARMC5Q96C12 935 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM176AQ96HP8 235 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SCYL1Q96KG9 808 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 WDR24Q96S15 920 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF347Q96SE7 839 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 TCF12Q99081 682 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 DPH2Q9BQC3 489 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SYT3Q9BQG1 590 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SPRR2GQ9BYE4 73 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SPRY4Q9C004 299 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SRCIN1Q9C0H9 1055 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 WNT10AQ9GZT5 417 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SPRTNQ9H040 489 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 KATNBL1Q9H079 304 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 AP5M1Q9H0R1 490 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CDCP1Q9H5V8 836 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 C12orf49Q9H741 205 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 RXFP1Q9HBX9 757 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PLSCR4Q9NRQ2 329 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM39AQ9NV64 488 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ASB6Q9NWX5 421 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 LRIT1Q9P2V4 623 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ASH2LQ9UBL3 628 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MKRN1Q9UHC7 482 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ADAMTS5Q9UNA0 930 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 NOVA2Q9UNW9 492 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 KIAA1024Q9UPX6 916 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 AMOTL2Q9Y2J4 779 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 WBP11Q9Y2W2 641 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MTO1Q9Y2Z2 717 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 AFG3L2Q9Y4W6 797 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 WNT6Q9Y6F9 365 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PRRC2AP48634 2157 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MUC6Q6W4X9 2439 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 XDHP47989 1333 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 LY6G6EA0A0G2JKS1 128 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SPRR5A0A1B0GTR4 108 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 A0A1W2PRX2 142 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PMS2P1A4D2B8 440 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 USP17L5A8MUK1 530 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 H3BNX3 289 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 IFNL4K9M1U5 179 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TULP1O00294 542 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PIK3CDO00329 1044 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RNASET2O00584 256 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 MGST3O14880 152 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 WNT9AO14904 365 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZBTB39O15060 712 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC26A4O43511 780 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SIGLEC6O43699 453 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ORC4O43929 436 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 LPXNO60711 386 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 LRRN2O75325 713 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CDKL5O76039 1030 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 IPO13O94829 963 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TRIM37O94972 964 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SCAF4O95104 1147 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TOMM40O96008 361 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SP1P08047 785 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NGFRP08138 427 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms